RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 NDUFS1P28331 727 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 ILF3Q12906 894 aaKnown RBP eCLIP17.09■□□□□ 0.332e-7■■■■□ 19.4
ECHDC1-214ENST00000474289 SWI5Q1ZZU3 235 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 LY6G6FQ5SQ64 297 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 DHRS7BQ6IAN0 325 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 DCUN1D3Q8IWE4 304 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 SLC16A11Q8NCK7 471 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 OR1S2Q8NGQ3 325 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 DUSP19Q8WTR2 217 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 PHYHIPQ92561 330 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 C2orf42Q9NWW7 574 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 PCYT1BQ9Y5K3 369 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 TRAV20A0A0B4J274 112 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 KANTRA0A1W2PQU2 76 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 H7C417 338 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 RBBP9O75884 186 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 GLSO94925 669 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 PAK4O96013 591 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 ACAA1P09110 424 aaPredicted RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 BDKRB2P30411 391 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 RNF113BQ8IZP6 322 aaKnown RBP17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 ARMC10Q8N2F6 343 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 OR51S1Q8NGJ8 323 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 ADAMTS15Q8TE58 950 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 ACTRT3Q9BYD9 372 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 MTFP1Q9UDX5 166 aa17.09■□□□□ 0.33
ECHDC1-214ENST00000474289 SLC25A12O75746 678 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 AIFM1O95831 613 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 IFNA4P05014 189 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 CD1AP06126 327 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 OR2T7P0C7T2 308 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 CALCBP10092 127 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 ERGP11308 486 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 ITPKBP27987 946 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 DCDP81605 110 aaKnown RBP17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 PLA2G7Q13093 441 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 SMAD2Q15796 467 aaKnown RBP17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 RANBP3LQ86VV4 465 aaPredicted RBP17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 KCNRGQ8N5I3 272 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 OR2T27Q8NH04 317 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 NANPQ8TBE9 248 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 ASB13Q8WXK3 278 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 CDS1Q92903 461 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 C6orf106Q9H6K1 298 aaPredicted RBP17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 IL21RQ9HBE5 538 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 APMAPQ9HDC9 416 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 WDR45Q9Y484 360 aa17.08■□□□□ 0.33
ECHDC1-214ENST00000474289 A0A1W2PQ45 241 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 A0A1W2PQY0 241 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 TSPAN11A1L157 253 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 IDSB3KWA1 339 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 F3P13726 295 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 CSNK2A2P19784 350 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 AGTR1P30556 359 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 OR1Q1Q15612 314 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 PAN3Q58A45 887 aaKnown RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 TMPRSS11FQ6ZWK6 438 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 KRT77Q7Z794 578 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 SPAG16Q8N0X2 631 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 ZFP82Q8N141 532 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 SDR9C7Q8NEX9 313 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 OR2L2Q8NH16 312 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 C15orf40Q8WUR7 153 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 RGP1Q92546 391 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 TFGQ92734 400 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 CNN2Q99439 309 aaKnown RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF471Q9BX82 626 aaPredicted RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 GAREM1Q9H706 876 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 LHX6Q9UPM6 363 aa17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 NOSIPQ9Y314 301 aaKnown RBP17.08■□□□□ 0.32
ECHDC1-214ENST00000474289 RAB19A4D1S5 217 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 GPRIN2O60269 458 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 FGF18O76093 207 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 LYPD3O95274 346 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 CRYBA1P05813 215 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 ITGB8P26012 769 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 EEF1A1P68104 462 aaKnown RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 TMCO2Q7Z6W1 182 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM25Q86YD3 366 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC35F2Q8IXU6 374 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 DMBX1Q8NFW5 382 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 THAP6Q8TBB0 222 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 ARSGQ96EG1 525 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 DTD2Q96FN9 168 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 MTHFD2LQ9H903 347 aaPredicted RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF337Q9Y3M9 751 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 LRRK1Q38SD2 2015 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 A0A087WV48 116 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 C17orf113A0A1B0GUU1 675 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 A0A1W2PPV9 198 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 FABP1P07148 127 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 CSNK1G2P78368 415 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 SNTB1Q13884 538 aaKnown RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 BEX5Q5H9J7 111 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 MRM1Q6IN84 353 aaKnown RBP17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 FAM111BQ6SJ93 734 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 MAMSTRQ6ZN01 415 aa17.07■□□□□ 0.32
ECHDC1-214ENST00000474289 BEST3Q8N1M1 668 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms