RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 GSAPA4D1B5 854 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 TRIM49BA6NDI0 452 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 LRRIQ4A6NIV6 560 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 WASHC1A8K0Z3 465 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PMS2P5A8MQ11 134 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 HHLA1C9JL84 531 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FAM72CH0Y354 149 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 H3BMH7 237 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 BLOC1S5-TXNDC5H3BN57 136 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 XPO1O14980 1071 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 POLR1CO15160 346 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZW10O43264 779 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZNF208O43345 1280 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 NUDT21O43809 227 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 EDIL3O43854 480 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 TPST2O60704 377 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 TBX19O60806 448 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DNAJB6O75190 326 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CIB2O75838 187 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 AP2A2O94973 939 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PPP1R3DO95685 299 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PAK4O96013 591 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 KRT8P05787 483 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FCER2P06734 321 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PAX1P15863 534 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DRD5P21918 477 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PRKACGP22612 351 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CALB2P22676 271 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 HTR2AP28223 471 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PTPN4P29074 926 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PTPN6P29350 595 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PDHA2P29803 388 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 MMP12P39900 470 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PEX19P40855 299 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 SSR1P43307 286 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 HTR5AP47898 357 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 KRTAP10-12P60413 245 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 RPL27P61353 136 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 PSMC5P62195 406 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PPIAP62937 165 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 RPS27AP62979 156 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 RPL36AP83881 106 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 CBX1P83916 185 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 SPIBQ01892 262 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 EIF2B1Q14232 305 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 RBBP5Q15291 538 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 CNPY1Q3B7I2 92 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZNF718Q3SXZ3 478 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZNF672Q499Z4 452 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 BOLA3Q53S33 107 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 C6orf52Q5T4I8 152 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 C9orf64Q5T6V5 341 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FAM72AQ5TYM5 149 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 AGAP7PQ5VUJ5 663 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 SLX4IPQ5VYV7 408 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 BSPRYQ5W0U4 402 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 WSCD1Q658N2 575 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ASPHD2Q6ICH7 369 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FAM72DQ6L9T8 149 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 NIPAL3Q6P499 406 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 KCNIP4Q6PIL6 250 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 LCLAT1Q6UWP7 414 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 IGFL2Q6UWQ7 119 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 RANBP3LQ86VV4 465 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 PAQR7Q86WK9 346 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 FAM72BQ86X60 149 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CBWD2Q8IUF1 395 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 WDR49Q8IV35 697 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 UBQLNLQ8IYU4 475 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DND1Q8IYX4 353 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 SLC22A15Q8IZD6 547 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 GVQW1Q8N7I0 195 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 MINDY2Q8NBR6 621 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ADAD2Q8NCV1 583 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 OR4D9Q8NGE8 314 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 OR5AP2Q8NGF4 316 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 OR6F1Q8NGZ6 308 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CT55Q8WUE5 264 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZNRF4Q8WWF5 429 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 MCHR2Q969V1 340 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 TUBGCP3Q96CW5 907 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 AKR1E2Q96JD6 320 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 TNFRSF13CQ96RJ3 184 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 RAB40CQ96S21 281 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 ZBTB18Q99592 522 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 PKMYT1Q99640 499 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 SYT15Q9BQS2 421 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DCTN5Q9BTE1 182 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 APOOQ9BUR5 198 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 CCDC94Q9BW85 323 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 RBM24Q9BX46 236 aaKnown RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 RAB11FIP5Q9BXF6 653 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 SPZ1Q9BXG8 430 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 POLR3FQ9H1D9 316 aaPredicted RBP1.97□□□□□ -2.09
CALD1-216ENST00000473714 LPAR2Q9HBW0 351 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 KCNJ16Q9NPI9 418 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 LHX9Q9NQ69 397 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.97□□□□□ -2.09
CALD1-216ENST00000473714 MED29Q9NX70 200 aa1.97□□□□□ -2.09
CALD1-216ENST00000473714 DCAF16Q9NXF7 216 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms