RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 KAT8Q9H7Z6 458 aaKnown RBP13.75□□□□□ -0.21
MRPL55-226ENST00000473066 SAR1AQ9NR31 198 aa13.75□□□□□ -0.21
MRPL55-226ENST00000473066 KLHL14Q9P2G3 628 aa13.75□□□□□ -0.21
MRPL55-226ENST00000473066 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 OR6C65A6NJZ3 312 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 M0R3H8 397 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 TMCC2O75069 709 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF43P17038 809 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 ADAM8P78325 824 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 BSPH1Q075Z2 132 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 C1DQ13901 141 aaKnown RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 OR1Q1Q15612 314 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 VMACQ2NL98 169 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 Q5PR19 223 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 SWT1Q5T5J6 900 aaKnown RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 TSPO2Q5TGU0 170 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 C9orf135Q5VTT2 229 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 CGB2Q6NT52 195 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 C17orf78Q8N4C9 275 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 OR8J3Q8NGG0 315 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 LRRC58Q96CX6 371 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 KTI12Q96EK9 354 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 PERPQ96FX8 193 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 MCHR1Q99705 422 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 SLC7A10Q9NS82 523 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 GID8Q9NWU2 228 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 AMDHD2Q9Y303 409 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 MAGED1Q9Y5V3 778 aaPredicted RBP13.74□□□□□ -0.21
MRPL55-226ENST00000473066 HIVEP1P15822 2718 aa13.74□□□□□ -0.21
MRPL55-226ENST00000473066 A0A0B4J2E0 115 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 A0A1B0GX12 115 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 FTCDNL1E5RQL4 147 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF587BE7ETH6 402 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 M0QX08 132 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 FBP2O00757 339 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 FMO6PO60774 539 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 NPPAP01160 153 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 C8BP07358 591 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ITGA5P08648 1049 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 NQO1P15559 274 aaKnown RBP13.73□□□□□ -0.21
MRPL55-226ENST00000473066 MPGP29372 298 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 MDH1P40925 334 aaKnown RBP13.73□□□□□ -0.21
MRPL55-226ENST00000473066 EGR4Q05215 589 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 NANOGP8Q6NSW7 305 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ADAM5Q6NVV9 412 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 NIPAL3Q6P499 406 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 TMEM108Q6UXF1 575 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 COMTD1Q86VU5 262 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 C10orf53Q8N6V4 93 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 KBTBD8Q8NFY9 601 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 VANGL1Q8TAA9 524 aaPredicted RBP13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ARHGDIGQ99819 225 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 PTDSS2Q9BVG9 487 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 TMUB1Q9BVT8 246 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 ASPNQ9BXN1 380 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 NANOGQ9H9S0 305 aa13.73□□□□□ -0.21
MRPL55-226ENST00000473066 CELSR1Q9NYQ6 3014 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 A0A087WUJ7 227 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 M0R082 166 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 SLC22A2O15244 555 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ATP8B1O43520 1251 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 LGI1O95970 557 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 CDH2P19022 906 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-226ENST00000473066 GRPRP30550 384 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 NTF4P34130 210 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF83P51522 516 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 CDH11P55287 796 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 RPS4XP62701 263 aaKnown RBP13.72□□□□□ -0.21
MRPL55-226ENST00000473066 GABRA6Q16445 453 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 NRF1Q16656 503 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 RABL3Q5HYI8 236 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 CREB3L2Q70SY1 520 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 DEPDC4Q8N2C3 294 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 WFDC11Q8NEX6 87 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF417Q8TAU3 575 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 PROX1Q92786 737 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 OXGR1Q96P68 337 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ZNF587Q96SQ5 575 aaPredicted RBP13.72□□□□□ -0.21
MRPL55-226ENST00000473066 PRR14Q9BWN1 585 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 ALG2Q9H553 416 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 FAIMQ9NVQ4 179 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 POU2F3Q9UKI9 436 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 MGAT4BQ9UQ53 548 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 RCE1Q9Y256 329 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 B3GALT5Q9Y2C3 310 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 CORINQ9Y5Q5 1042 aa13.72□□□□□ -0.21
MRPL55-226ENST00000473066 USF3Q68DE3 2245 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 LOC100653049A0A140TA62 436 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 A0A1W2PR80 420 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 DPRXA6NFQ7 191 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 CPSF4LA6NMK7 179 aaKnown RBP13.71□□□□□ -0.21
MRPL55-226ENST00000473066 M0R1B8 84 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 FXYD1O00168 92 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 ABCD4O14678 606 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 CHP2O43745 196 aa13.71□□□□□ -0.21
MRPL55-226ENST00000473066 SLC43A1O75387 559 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms