RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DEPDC7Q96QD5 511 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 TBX5Q99593 518 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 SDHCQ99643 169 aaPredicted RBP6.97□□□□□ -1.29
CCDC171-205ENST00000472806 ATF6BQ99941 703 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 MRI1Q9BV20 369 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 OR8D2Q9GZM6 311 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC171-205ENST00000472806 MIXL1Q9H2W2 232 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 ZNF768Q9H5H4 540 aaKnown RBP6.97□□□□□ -1.29
CCDC171-205ENST00000472806 MED20Q9H944 212 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 FKRPQ9H9S5 495 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 NANSQ9NR45 359 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 C2orf42Q9NWW7 574 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 COMMD3Q9UBI1 195 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 SUSD2Q9UGT4 822 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 DTX4Q9Y2E6 619 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 YARS2Q9Y2Z4 477 aaKnown RBP6.97□□□□□ -1.29
CCDC171-205ENST00000472806 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 SLCO1B1Q9Y6L6 691 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 MAU2Q9Y6X3 613 aa6.97□□□□□ -1.29
CCDC171-205ENST00000472806 CCDC163A0A0D9SF12 145 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 A0A1W2PQ09 198 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF879B4DU55 563 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 MCIDASD6RGH6 385 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 H3BMH7 237 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OGG1O15527 345 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 NDUFB5O43674 189 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SDC3O75056 442 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TXNDC12O95881 172 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 LALBAP00709 142 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 RENP00797 406 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 MT-ATP6P00846 226 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 HLA-DQB1P01920 261 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 IGKV3-11P04433 115 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CYC1P08574 325 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 MRPL3P09001 348 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 GP1BBP13224 206 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 HIST1H1CP16403 213 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CXCR1P25024 350 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 RBMS1P29558 406 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SDHAP31040 664 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 HTR3AP46098 478 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OR1D4P47884 311 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TGM4P49221 684 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 EVX1P49640 407 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CSNK1EP49674 416 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 BLVRAP53004 296 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OR1D5P58170 312 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 RPS4XP62701 263 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 PITPNAQ00169 270 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 PLCXD2Q0VAA5 305 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SQSTM1Q13501 440 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CBFBQ13951 182 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 IL18Q14116 193 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 EBPQ15125 230 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 QPRTQ15274 297 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SF3A2Q15428 464 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 NSDHLQ15738 373 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TAB1Q15750 504 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF79Q15937 498 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF74Q16587 644 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CDONQ4KMG0 1287 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ALG10Q5BKT4 473 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF362Q5T0B9 420 aaPredicted RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 AGAP6Q5VW22 663 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 NKAIN2Q5VXU1 208 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 DMKNQ6E0U4 476 aaPredicted RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 FAAH2Q6GMR7 532 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CNIH2Q6PI25 160 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TMEM91Q6ZNR0 172 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OVCH1Q7RTY7 1134 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 FAM220AQ7Z4H9 259 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 NANOGNBQ7Z5D8 188 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CEACAM19Q7Z692 300 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 UBALD2Q8IYN6 164 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SDR9C7Q8NEX9 313 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OR1N1Q8NGS0 311 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OR2T4Q8NH00 348 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 OR1L3Q8NH93 324 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 MOSPD2Q8NHP6 518 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ABHD4Q8TB40 342 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ENKURQ8TC29 256 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ZNF721Q8TF20 911 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 THAP4Q8WY91 577 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ADIPOR1Q96A54 375 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CLIP3Q96DZ5 547 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SMIM19Q96E16 107 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 CMTM3Q96MX0 182 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 AGAP4Q96P64 663 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 SNX18Q96RF0 628 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ELF4Q99607 663 aaPredicted RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 HCAR1Q9BXC0 346 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TBL1XR1Q9BZK7 514 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 FOXQ1Q9C009 403 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ENKD1Q9H0I2 346 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 NXF5Q9H1B4 397 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ISG20L2Q9H9L3 353 aaKnown RBP6.96□□□□□ -1.3
CCDC171-205ENST00000472806 TIGARQ9NQ88 270 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 C14orf119Q9NWQ9 140 aa6.96□□□□□ -1.3
CCDC171-205ENST00000472806 ABRACLQ9P1F3 81 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms