RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 TACR3P29371 465 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 LSP1P33241 339 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ARR3P36575 388 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PTDSS1P48651 473 aaKnown RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 POLR2HP52434 150 aaKnown RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CLDN17P56750 224 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SLC7A5Q01650 507 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GLO1Q04760 184 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 BNIP2Q12982 314 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 MAPK14Q16539 360 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CEACAM16Q2WEN9 425 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PGS1Q32NB8 556 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GPAT3Q53EU6 434 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PRAMEF8Q5VWM4 474 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PRAMEF7Q5VXH5 474 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PAQR6Q6TCH4 344 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ZDHHC24Q6UX98 284 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 LINGO2Q7L985 606 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 RETREG3Q86VR2 466 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 KDM8Q8N371 416 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CADM2Q8N3J6 435 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ZIC4Q8N9L1 334 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GLB1L3Q8NCI6 653 aaPredicted RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SNX33Q8WV41 574 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 DCAKDQ8WVC6 231 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 XAGE5Q8WWM1 108 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PMM1Q92871 262 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 TMEM45BQ96B21 275 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SLC25A36Q96CQ1 311 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 TIMD4Q96H15 378 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SLC35G5Q96KT7 338 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GPA33Q99795 319 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CCT7Q99832 543 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 MMP27Q9H306 513 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 KCNF1Q9H3M0 494 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 GSTO2Q9H4Y5 243 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 ACSS3Q9H6R3 686 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 DECR2Q9NUI1 292 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 EXD2Q9NVH0 621 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 NINJ2Q9NZG7 142 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 TAAR3PQ9P1P4 343 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 KCNE5Q9UJ90 142 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PCDHGB4Q9UN71 923 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 SLC35A3Q9Y2D2 325 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
HDAC1-204ENST00000471488 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
HDAC1-204ENST00000471488 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF503-AS2A6NEH8 195 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 NPIPB9F8W1W9 429 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 M0R3G1 203 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ETV2O00321 342 aaPredicted RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 TIMM23O14925 209 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 SCAMP2O15127 329 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 PIN1P1O15428 100 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF432O94892 652 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 RAB36O95755 333 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CHEK2O96017 543 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 IGKV3-15P01624 115 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 IGLV1-44P01699 117 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 IGHV2-5P01817 119 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 FAM157BP0CG42 384 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 UROSP10746 265 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 MYL2P10916 166 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 LAMP1P11279 417 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 UQCRBP14927 111 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 NR4A1P22736 598 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 FKBP2P26885 142 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 RBMXP38159 391 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 MAGEA12P43365 314 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 HTR3AP46098 478 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CLK1P49759 484 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 PRKAA2P54646 552 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 SELENOVP59797 346 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 H3F3AP84243 136 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 C1DQ13901 141 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ZNF141Q15928 474 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 MSMPQ1L6U9 139 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 HFEQ30201 348 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 LSM12Q3MHD2 195 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 RFTN2Q52LD8 501 aaPredicted RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ATG16L1Q676U5 607 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 TNFAIP8L2Q6P589 184 aaPredicted RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 EMBQ6PCB8 327 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 USP51Q70EK9 711 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CREB3L2Q70SY1 520 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 TRIM46Q7Z4K8 759 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 OR2T11Q8NH01 316 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 AGR3Q8TD06 166 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 OR5P2Q8WZ92 322 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CCL17Q92583 94 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 CNOT9Q92600 299 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 RAB1CQ92928 201 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 ZDHHC16Q969W1 377 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 LRRC58Q96CX6 371 aa5.88□□□□□ -1.47
HDAC1-204ENST00000471488 PRPF18Q99633 342 aaKnown RBP5.88□□□□□ -1.47
HDAC1-204ENST00000471488 C1orf50Q9BV19 199 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms