RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 MAKP20794 623 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 PAICSP22234 425 aaKnown RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 ITGA3P26006 1051 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DCKP27707 260 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 TACR3P29371 465 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 PTGDSP41222 190 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SOX3P41225 446 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 GTF2A1P52655 376 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 POU4F2Q12837 409 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SNAPC1Q16533 368 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 PLPPR5Q32ZL2 321 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 KLHL22Q53GT1 634 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SYT14P1Q58G82 188 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 ACER2Q5QJU3 275 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 FAM69BQ5VUD6 431 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 NXNL2Q5VZ03 156 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 FAM205BPQ63HN1 556 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 SLC22A10Q63ZE4 541 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 B3GNTL1Q67FW5 361 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 HIST2H2BCQ6DN03 193 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 Q6ZS92 163 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 PLCZ1Q86YW0 608 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 CCDC103Q8IW40 242 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 CISD2Q8N5K1 135 aaKnown RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 TMEM156Q8N614 296 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 ZNF540Q8NDQ6 660 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 BPIFB6Q8NFQ5 453 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 OR10G3Q8NGC4 313 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 OR8D4Q8NGM9 314 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 PFN4Q8NHR9 129 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 CNIH3Q8TBE1 160 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DUSP19Q8WTR2 217 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DDIT4LQ96D03 193 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DGCR14Q96DF8 476 aaKnown RBP8.28□□□□□ -1.08
PTPRE-207ENST00000471218 COPS4Q9BT78 406 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 LHPPQ9H008 270 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 FANCFQ9NPI8 374 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 NANSQ9NR45 359 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 INPP5EQ9NRR6 644 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 C20orf141Q9NUB4 165 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 ASF1BQ9NVP2 202 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 CHRNA9Q9UGM1 479 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 NINQ8N4C6 2090 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 LRBAP50851 2863 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 CNTRLQ7Z7A1 2325 aa8.28□□□□□ -1.08
PTPRE-207ENST00000471218 DIDO1Q9BTC0 2240 aaKnown RBP8.27□□□□□ -1.08
PTPRE-207ENST00000471218 TEP1Q99973 2627 aaKnown RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 TMED7-TICAM2A0A0A6YYA0 188 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SLC22A31A6NKX4 558 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 RIIAD1A6NNX1 92 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SEC14L5O43304 696 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 AHCYL1O43865 530 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SUSD5O60279 629 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 PIP5K1CO60331 668 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MAN1A2O60476 641 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF354AO60765 605 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 AHSA1O95433 338 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 CLDN1O95832 211 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 NUDT14O95848 222 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HIST1H2ABP04908 130 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 CDK1P06493 297 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 EDN3P14138 238 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ATP6V1B1P15313 513 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF3P17036 446 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 PRKCAP17252 672 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HK1P19367 917 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HTR1FP30939 366 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 UQCRC1P31930 480 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 CYB561P49447 251 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 CENPAP49450 140 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 DSCR4P56555 118 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 FOXL2P58012 376 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 EGR4Q05215 589 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SELENBP1Q13228 472 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ATP1A4Q13733 1029 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SGCBQ16585 318 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF239Q16600 458 aaKnown RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 NDUFAF6Q330K2 333 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 AGAP7PQ5VUJ5 663 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 AADACL4Q5VUY2 407 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 UBE2UQ5VVX9 321 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ZNF787Q6DD87 383 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 GTF2IRD2BQ6EKJ0 949 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ACSM5Q6NUN0 579 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 C3orf33Q6P1S2 294 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MTFR2Q6P444 385 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HIST3H2AQ7L7L0 130 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SLC46A3Q7Z3Q1 461 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 HDDC2Q7Z4H3 204 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 GPR141Q7Z602 305 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 ADCK1Q86TW2 530 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 GTF2IRD2Q86UP8 949 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 SPARTQ8N0X7 666 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 GTPBP8Q8N3Z3 284 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-207ENST00000471218 GATSQ8NAP1 163 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 OR2M3Q8NG83 312 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 OR4K17Q8NGC6 315 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 MFSD8Q8NHS3 518 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
PTPRE-207ENST00000471218 THAP3Q8WTV1 239 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms