RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SLC46A1Q96NT5 459 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TGM7Q96PF1 710 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 GPX7Q96SL4 187 aaPredicted RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 MNTQ99583 582 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MAP3K3Q99759 626 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 C7orf50Q9BRJ6 194 aaKnown RBP7.32□□□□□ -1.24
SMC4-212ENST00000470240 ZNF649Q9BS31 505 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CHRNA10Q9GZZ6 450 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MMP28Q9H239 520 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 DPAGT1Q9H3H5 408 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 C12orf10Q9HB07 376 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CYSLTR2Q9NS75 346 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TMEM74BQ9NUR3 256 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 COPS7AQ9UBW8 275 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CHRNA9Q9UGM1 479 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 GNG8Q9UK08 70 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 ICAM5Q9UMF0 924 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 MOKQ9UQ07 419 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 TMEM131Q92545 1883 aa7.32□□□□□ -1.24
SMC4-212ENST00000470240 CENPFP49454 3210 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ARPC4-TTLL3A0A0A6YYG9 625 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 LOC100289279A0A1B0GTE1 492 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 A0A1W2PRG6 482 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ZC3H12DA2A288 527 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 FITM1A5D6W6 292 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 FRG2CA6NGY1 282 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 HSPB2A8KAH6 182 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 C17orf105B2RV13 164 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 LRRN3E7EW58 273 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NPIPB9F8W1W9 429 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 RGS13O14921 159 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 OGG1O15527 345 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ZNF264O43296 627 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 FZD7O75084 574 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SLC25A12O75746 678 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 OR2B3O76000 313 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 GLCEO94923 617 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SRFP11831 508 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 HIST1H1CP16403 213 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 ELK1P19419 428 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 S1PR1P21453 382 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ERP29P30040 261 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 ACVR1BP36896 505 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 DIO1P49895 249 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SLC25A1P53007 311 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 CLDN20P56880 219 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 OR12D2P58182 307 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 AP3S2P59780 193 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 PPP1CAP62136 330 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 BTG1P62324 171 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 RACK1P63244 317 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 SIRPAP78324 504 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 RIPPLY1Q0D2K3 151 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 MAB21L1Q13394 359 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ANGPT1Q15389 498 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 HSPB2Q16082 182 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 TATDN3Q17R31 274 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 CDONQ4KMG0 1287 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SNAP47Q5SQN1 464 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 YOD1Q5VVQ6 348 aaPredicted RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 FCRLBQ6BAA4 426 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 GPR139Q6DWJ6 353 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NUP54Q7Z3B4 507 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NANOGNBQ7Z5D8 188 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 PXKQ7Z7A4 578 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ZAR1Q86SH2 424 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 LUZP2Q86TE4 346 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NOXA1Q86UR1 476 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SLC35F3Q8IY50 421 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ARMC10Q8N2F6 343 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 TOMM5Q8N4H5 51 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ASCC1Q8N9N2 400 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 PHOSPHO1Q8TCT1 267 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.244e-24■■■■■ 140.6
SMC4-212ENST00000470240 GHSRQ92847 366 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 PTP4A1Q93096 173 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 ZMYND19Q96E35 227 aaPredicted RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 ZNF285Q96NJ3 590 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SCN2AQ99250 2005 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SOSTQ9BQB4 213 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 THAP7Q9BT49 309 aaPredicted RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 WACQ9BTA9 647 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 HCAR1Q9BXC0 346 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 RAB33BQ9H082 229 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 COMMD4Q9H0A8 199 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 LRRN3Q9H3W5 708 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 SLA2Q9H6Q3 261 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NRIP3Q9NQ35 241 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 NANSQ9NR45 359 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 PNO1Q9NRX1 252 aaKnown RBP7.31□□□□□ -1.24
SMC4-212ENST00000470240 RXFP3Q9NSD7 469 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 POU2F3Q9UKI9 436 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 RASD1Q9Y272 281 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 TMEM14AQ9Y6G1 99 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 CLCA3PQ9Y6N3 262 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 PCNTO95613 3336 aa7.31□□□□□ -1.24
SMC4-212ENST00000470240 CACNA1IQ9P0X4 2223 aa7.3□□□□□ -1.24
SMC4-212ENST00000470240 IGHV1OR15-9A0A0B4J2B8 117 aa7.3□□□□□ -1.24
SMC4-212ENST00000470240 A0A0G2JMP0 313 aa7.3□□□□□ -1.24
SMC4-212ENST00000470240 A0A0X1KG70 313 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms