RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 ABLIM2Q6H8Q1 611 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 ZFP1Q6P2D0 407 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 WDR88Q6ZMY6 472 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 TMPRSS11FQ6ZWK6 438 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 C10orf53Q8N6V4 93 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OR6K3Q8NGY3 331 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC7A13Q8TCU3 470 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 INTS12Q96CB8 462 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 BPIFA2Q96DR5 249 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 SGTBQ96EQ0 304 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 RSRC1Q96IZ7 334 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 KCNJ16Q9NPI9 418 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 PLSCR4Q9NRQ2 329 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 ARMC1Q9NVT9 282 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 RNF6Q9Y252 685 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 V9GYQ6 96 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 MYO7BQ6PIF6 2116 aa11.27□□□□□ -0.61
SPTLC1-204ENST00000469778 A0A087WUU8 490 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 A0A1W2PNV4 684 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 J3KTA2 159 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 MSTNO14793 375 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 HNRNPRO43390 633 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 CLDN14O95500 239 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 GRPRP30550 384 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 RRM2P31350 389 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 ARHGDIAP52565 204 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 PMS2P3Q13401 168 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC17A1Q14916 467 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 FBXL19-AS1Q494R0 122 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 PPP4R4Q6NUP7 873 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 PODNL1Q6PEZ8 512 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 PXKQ7Z7A4 578 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 GALNT5Q7Z7M9 940 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 RPRMLQ8N4K4 120 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 OR5J2Q8NH18 312 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 ITLN2Q8WWU7 325 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 ROBO4Q8WZ75 1007 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 UTP4Q969X6 686 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 SDCCAG3Q96C92 435 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 OXGR1Q96P68 337 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 ALPK1Q96QP1 1244 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 PSD2Q9BQI7 771 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 FUZQ9BT04 418 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 NDEL1Q9GZM8 345 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 REEP1Q9H902 201 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 CHST11Q9NPF2 352 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 MEPEQ9NQ76 525 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 C6orf203Q9P0P8 240 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 KLF2Q9Y5W3 355 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 HELZ2Q9BYK8 2649 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-204ENST00000469778 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF716A6NP11 495 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 GNGT2O14610 69 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 AKAP8O43823 692 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ZG16O60844 167 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 FKBP6O75344 327 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 DEAF1O75398 565 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 TNFSF13O75888 250 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 OR7A10O76100 309 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 AKR7A3O95154 331 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 CH25HO95992 272 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 CST1P01037 141 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 NQO1P15559 274 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ZNF43P17038 809 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 FUT1P19526 365 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 KIR2DL2P43627 348 aaPredicted RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 SPIBQ01892 262 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 FGD3Q5JSP0 725 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 C1QTNF12Q5T7M4 302 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 NRMQ8IXM6 262 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 TMEM99Q8N816 258 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ANKK1Q8NFD2 765 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ABHD3Q8WU67 409 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 TMEM45BQ96B21 275 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 NRBF2Q96F24 287 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 USB1Q9BQ65 265 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 SLC24A3Q9HC58 644 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 RHCGQ9UBD6 479 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 TESMINQ9Y4I5 508 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
SPTLC1-204ENST00000469778 ARRDC5A6NEK1 342 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 ENO4A6NNW6 628 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 EFCAB9A8MZ26 197 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
SPTLC1-204ENST00000469778 M0R082 166 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms