RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 NAAAQ02083 359 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 HGFACQ04756 655 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 GTDC1Q4AE62 458 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 KLHL24Q6TFL4 600 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 CMIPQ8IY22 773 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 POMGNT2Q8NAT1 580 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 AENQ8WTP8 325 aaKnown RBP10.65□□□□□ -0.7
HDAC3-204ENST00000469207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.65□□□□□ -0.78e-7■■■■■ 32.1
HDAC3-204ENST00000469207 SLC25A36Q96CQ1 311 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 RSPO3Q9BXY4 272 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-204ENST00000469207 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-204ENST00000469207 MEAF6Q9HAF1 191 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.65□□□□□ -0.7
HDAC3-204ENST00000469207 FKBP7Q9Y680 259 aa10.65□□□□□ -0.7
HDAC3-204ENST00000469207 LOC390937A0A1W2PQ73 354 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 TMEM129A0AVI4 362 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 A8MVM7 634 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 TMEM229AB2RXF0 380 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 B9A039 149 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 SDHDO14521 159 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 FRS3O43559 492 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 STAMBPO95630 424 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 CRYAAP02489 173 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 C8BP07358 591 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 IGFBP1P08833 259 aaPredicted RBP10.64□□□□□ -0.71
HDAC3-204ENST00000469207 CLNS1AP54105 237 aaKnown RBP10.64□□□□□ -0.71
HDAC3-204ENST00000469207 ARF1P84077 181 aaKnown RBP10.64□□□□□ -0.71
HDAC3-204ENST00000469207 BST1Q10588 318 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 STX3Q13277 289 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 GSTA3Q16772 222 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 CR1LQ2VPA4 569 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 C1orf140Q5VVS0 124 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 ATG16L1Q676U5 607 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 WBP2NLQ6ICG8 309 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 SERPINA11Q86U17 422 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 BOD1Q96IK1 185 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 TAPBPLQ9BX59 468 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 AIG1Q9NVV5 245 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 GPR45Q9Y5Y3 372 aa10.64□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF587BE7ETH6 402 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 HAX1O00165 279 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 NDUFS8O00217 210 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 BIRC5O15392 142 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 LILRA1O75019 489 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 NPIPB7O75200 414 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 SEC14L2O76054 403 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 BCHEP06276 602 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 NUDT7P0C024 238 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 TFPTP0C1Z6 253 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KITP10721 976 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF23P17027 643 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 CBLP22681 906 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 EPHA3P29320 983 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 THBS2P35442 1172 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 CRATP43155 626 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 RPS5P46782 204 aaKnown RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 IDH3GP51553 393 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 MAP2K6P52564 334 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 CLDN17P56750 224 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 UBE2NP61088 152 aaKnown RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 ROR2Q01974 943 aaKnown RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 EGR4Q05215 589 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 GNA13Q14344 377 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 TRIP10Q15642 601 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 DPY19L1Q2PZI1 675 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KRT71Q3SY84 523 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PHYHD1Q5SRE7 291 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PRAMEF8Q5VWM4 474 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PRAMEF7Q5VXH5 474 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PEX5LQ8IYB4 626 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 SVOPLQ8N434 492 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 TRIML2Q8N7C3 387 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 SLC38A5Q8WUX1 472 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 VPS33AQ96AX1 596 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KTI12Q96EK9 354 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 DOK1Q99704 481 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PAIP2Q9BPZ3 127 aaKnown RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KCNS3Q9BQ31 491 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KATNB1Q9BVA0 655 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PTDSS2Q9BVG9 487 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 KCNK9Q9NPC2 374 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 CRNNQ9UBG3 495 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 HAO1Q9UJM8 370 aa10.63□□□□□ -0.71
HDAC3-204ENST00000469207 ZNF443Q9Y2A4 671 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 V9GYY5 206 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-204ENST00000469207 FTCDNL1E5RQL4 147 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 hCG_2039718K7EN88 272 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 RFXANKO14593 260 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 RGS16O15492 202 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-204ENST00000469207 IGLV1-44P01699 117 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 PNMTP11086 282 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 DAOP14920 347 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 UQCRBP14927 111 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 NCF2P19878 526 aaPredicted RBP10.62□□□□□ -0.71
HDAC3-204ENST00000469207 COPZ1P61923 177 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 NPRL3Q12980 569 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 EFNB3Q15768 340 aa10.62□□□□□ -0.71
HDAC3-204ENST00000469207 MSMPQ1L6U9 139 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms