RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SNX18Q96RF0 628 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CNN2Q99439 309 aaKnown RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 COQ7Q99807 217 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CHCHD6Q9BRQ6 235 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 KATNB1Q9BVA0 655 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 GPR87Q9BY21 358 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 RTN4RQ9BZR6 473 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ENKD1Q9H0I2 346 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 AKIRIN1Q9H9L7 192 aaPredicted RBP8.48□□□□□ -1.05
SMC1A-205ENST00000469129 TRIM36Q9NQ86 728 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 ERVK13-1Q9NX77 482 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CLEC2DQ9UHP7 191 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 SSR3Q9UNL2 185 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 CORINQ9Y5Q5 1042 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 A3GALT2U3KPV4 340 aa8.48□□□□□ -1.05
SMC1A-205ENST00000469129 WDR87Q6ZQQ6 2873 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 A0A087WZY1 265 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 TEX13CA0A0J9YWL9 993 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 DAPL1A0PJW8 107 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 C12orf71A8MTZ7 269 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 LRRN3E7EW58 273 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ADAM10O14672 748 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SLC30A4O14863 429 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF354AO60765 605 aaPredicted RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 NPIPB7O75200 414 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 DKK1O94907 266 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR6A2O95222 327 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 APOL3O95236 402 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 RENP00797 406 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 IGHMP01871 453 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SBK2P0C263 348 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 HIST1H1CP16403 213 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OTX2P32243 289 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 AQP2P41181 271 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 EIF1P41567 113 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 CENPAP49450 140 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SLC25A1P53007 311 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 CTXN1P60606 82 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 LSM3P62310 102 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ACTA2P62736 377 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ERVK-25P63136 954 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ACTG2P63267 376 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 HSF2Q03933 536 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 DCTN2Q13561 401 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 KRR1Q13601 381 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 DNASE1L3Q13609 305 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 TPBGQ13641 420 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 PON3Q15166 354 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SSX1Q16384 188 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 MOGQ16653 247 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 RSPO4Q2I0M5 234 aaPredicted RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF791Q3KP31 576 aaPredicted RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 FAM205BPQ63HN1 556 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 FCRLBQ6BAA4 426 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 C3orf33Q6P1S2 294 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 POMZP3Q6PJE2 187 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 C16orf47Q6ZP98 133 aaPredicted RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SHFQ7M4L6 423 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 PPP1R32Q7Z5V6 425 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 IGFN1Q86VF2 1251 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ATCAYQ86WG3 371 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 CACTIN-AS1Q8N1I8 211 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SCAIQ8N9R8 606 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 LRRC75AQ8NAA5 344 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 NLGN4YQ8NFZ3 816 aaPredicted RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR10H4Q8NGA5 316 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR4F15Q8NGB8 312 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR10G3Q8NGC4 313 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR4K17Q8NGC6 315 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR4K13Q8NH42 304 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 MOSPD2Q8NHP6 518 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 TBC1D15Q8TC07 691 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 RPL3LQ92901 407 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 TAAR8Q969N4 342 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 IP6K3Q96PC2 410 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 TEAD3Q99594 435 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 MESP1Q9BRJ9 268 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ARHGAP9Q9BRR9 750 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ALG8Q9BVK2 526 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 OR51V1Q9H2C8 321 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 MED20Q9H944 212 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SIAEQ9HAT2 523 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ZNF160Q9HCG1 818 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 GALNT9Q9HCQ5 603 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 EXOSC4Q9NPD3 245 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 KLHL1Q9NR64 748 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 SERINC1Q9NRX5 453 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 INIPQ9NRY2 104 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 HPF1Q9NWY4 346 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 GRHPRQ9UBQ7 328 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 MOKQ9UQ07 419 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 FARSAQ9Y285 508 aaKnown RBP8.47□□□□□ -1.05
SMC1A-205ENST00000469129 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 NOX1Q9Y5S8 564 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 DMXL1Q9Y485 3027 aa8.47□□□□□ -1.05
SMC1A-205ENST00000469129 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.46□□□□□ -1.06
SMC1A-205ENST00000469129 C9orf172C9J069 976 aa8.46□□□□□ -1.06
SMC1A-205ENST00000469129 J3QRE1 110 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms