RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 WDR74Q6RFH5 385 aaPredicted RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 UNQ9370/PRO34162Q6UXP9 181 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 ACOT7LQ6ZUV0 252 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 EFL1Q7Z2Z2 1120 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 ZNF589Q86UQ0 364 aaPredicted RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 SCFD1Q8WVM8 642 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 PGLYRP4Q96LB8 373 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 RBM14Q96PK6 669 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 NPY6RQ99463 290 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 GAL3ST1Q99999 423 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 NMUR2Q9GZQ4 415 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 PTGES2Q9H7Z7 377 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 POLE4Q9NR33 117 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 PRPF19Q9UMS4 504 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 MUC6Q6W4X9 2439 aa3.63□□□□□ -1.83
LSM5-209ENST00000468872 VIRMAQ69YN4 1812 aaKnown RBP3.63□□□□□ -1.83
LSM5-209ENST00000468872 ABCA7Q8IZY2 2146 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 MARF1Q9Y4F3 1742 aaKnown RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 NAV2Q8IVL1 2488 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 NEXMIFQ5QGS0 1516 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 IDSB3KWA1 339 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZNF264O43296 627 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 RAMP3O60896 148 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 B4GALT2O60909 372 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ATP5LO75964 103 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 TIMP1P01033 207 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 RBMY1CP0DJD4 496 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZBTB25P24278 435 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 RPL13AP40429 203 aaKnown RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 CEBPDP49716 269 aaPredicted RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 SLC26A2P50443 739 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 PLK1P53350 603 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZMYND11Q15326 602 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZNF544Q6NX49 715 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ARCQ7LC44 396 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 DHDDSQ86SQ9 333 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZNF584Q8IVC4 421 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 MAIP1Q8WWC4 291 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 HTR3CQ8WXA8 447 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 CHCHD10Q8WYQ3 142 aaPredicted RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 TIMD4Q96H15 378 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 ZNF414Q96IQ9 312 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 RPRD1AQ96P16 312 aaPredicted RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 YY1AP1Q9H869 796 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 FN3KRPQ9HA64 309 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 MCCC2Q9HCC0 563 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 LAMA3Q16787 3333 aa3.62□□□□□ -1.83
LSM5-209ENST00000468872 USP9XQ93008 2570 aaPredicted RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
LSM5-209ENST00000468872 LTBP1Q14766 1721 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 ZNF292O60281 2723 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 SNTNA6NMZ2 147 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 POLR2DO15514 142 aaKnown RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 FCMRO60667 390 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 CCDC130P13994 396 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 NPR2P20594 1047 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 HTR1FP30939 366 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 UGT1A5P35504 534 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 BTDP43251 543 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 DUSP3P51452 185 aaPredicted RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 ATP1B3P54709 279 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 ZNF45Q02386 682 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 KYAT1Q16773 422 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 NSUN5P1Q3KNT7 163 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 DMRTC1Q5HYR2 192 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 KLF17Q5JT82 389 aaPredicted RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 OR2G6Q5TZ20 316 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 FAM220AQ7Z4H9 259 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 C14orf178Q8N769 122 aaPredicted RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 OR13C2Q8NGS9 318 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 ST8SIA1Q92185 356 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 UBE2E3Q969T4 207 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 C10orf35Q96D05 121 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 CNOT6LQ96LI5 555 aaKnown RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 PLEKHF1Q96S99 279 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 MYCBPQ99417 103 aaPredicted RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 GCOM2Q9BZD3 368 aaPredicted RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 RAB34Q9BZG1 259 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 ISG20L2Q9H9L3 353 aaKnown RBP3.61□□□□□ -1.83
LSM5-209ENST00000468872 HYPKQ9NX55 129 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 B4GALT7Q9UBV7 327 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 DCDC2Q9UHG0 476 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 HPCAL4Q9UM19 191 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 KIF25-AS1Q9Y6Z4 181 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 NCOA3Q9Y6Q9 1424 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 ZNF462Q96JM2 2506 aa3.61□□□□□ -1.83
LSM5-209ENST00000468872 IGKV1D-8A0A087WSZ0 117 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 DCTN6O00399 190 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 TIMM8AO60220 97 aaPredicted RBP3.6□□□□□ -1.83
LSM5-209ENST00000468872 LY6G6DO95868 133 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 LGI1O95970 557 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 ZNF853P0CG23 659 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 GNA11P29992 359 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 CCR1P32246 355 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 RDXP35241 583 aaKnown RBP3.6□□□□□ -1.83
LSM5-209ENST00000468872 SEC61GP60059 68 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 NDPQ00604 133 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 VGLL4Q14135 290 aa3.6□□□□□ -1.83
LSM5-209ENST00000468872 ARL6IP1Q15041 203 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms