RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ATP6V1G3Q96LB4 118 aa19.09■□□□□ 0.65
TTC28-204ENST00000468807 AMBRA1Q9C0C7 1298 aa19.09■□□□□ 0.65
TTC28-204ENST00000468807 SLAMF8Q9P0V8 285 aa19.09■□□□□ 0.65
TTC28-204ENST00000468807 DNHD1Q96M86 4753 aa19.08■□□□□ 0.65
TTC28-204ENST00000468807 TMEM229AB2RXF0 380 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 VAMP5O95183 116 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 WNT11O96014 354 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 BMP2P12643 396 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 HOXB9P17482 250 aaPredicted RBP19.08■□□□□ 0.64
TTC28-204ENST00000468807 MRPL19P49406 292 aaKnown RBP19.08■□□□□ 0.64
TTC28-204ENST00000468807 SELENOPP49908 381 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 P2RY4P51582 365 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 NUDT6P53370 316 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 LGALS3BPQ08380 585 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 HIKESHIQ53FT3 197 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 AGKQ53H12 422 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 CREB3L2Q70SY1 520 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 MSRB3Q8IXL7 192 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 KDM8Q8N371 416 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 RNF217Q8TC41 542 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 HTRA1Q92743 480 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 ALKBH3Q96Q83 286 aaPredicted RBP19.08■□□□□ 0.64
TTC28-204ENST00000468807 CCDC28BQ9BUN5 200 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 GRIP2Q9C0E4 1043 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 FKRPQ9H9S5 495 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 CBLN4Q9NTU7 201 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.08■□□□□ 0.64
TTC28-204ENST00000468807 RASD1Q9Y272 281 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 CR1P17927 2039 aa19.08■□□□□ 0.64
TTC28-204ENST00000468807 ZNF587BE7ETH6 402 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 NPIPB7O75200 414 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 TP53P04637 393 aaPredicted RBP19.07■□□□□ 0.64
TTC28-204ENST00000468807 ARAFP10398 606 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 IRX1P78414 480 aaPredicted RBP19.07■□□□□ 0.64
TTC28-204ENST00000468807 CDK6Q00534 326 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 DMTNQ08495 405 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 NRF1Q16656 503 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 TTMPQ5BVD1 217 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 PAGE3Q5JUK9 113 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 LRIF1Q5T3J3 769 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 KRT73Q86Y46 540 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 MFSD8Q8NHS3 518 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 KTI12Q96EK9 354 aaPredicted RBP19.07■□□□□ 0.64
TTC28-204ENST00000468807 PIF1Q9H611 641 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 TMEM45AQ9NWC5 275 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 VAPAQ9P0L0 249 aa19.07■□□□□ 0.64
TTC28-204ENST00000468807 SONP18583 2426 aaKnown RBP19.07■□□□□ 0.64
TTC28-204ENST00000468807 LGI1O95970 557 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 PNMTP11086 282 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 ETS2P15036 469 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 PPIBP23284 216 aaKnown RBP19.06■□□□□ 0.64
TTC28-204ENST00000468807 PRKAR1BP31321 381 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 NCALDP61601 193 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 IL1RL1Q01638 556 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 RAB35Q15286 201 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 REEP3Q6NUK4 255 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 EPHX4Q8IUS5 362 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 C10orf111Q8N326 155 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 THOC1Q96FV9 657 aaKnown RBP19.06■□□□□ 0.64
TTC28-204ENST00000468807 RHNO1Q9BSD3 238 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 SPATA5L1Q9BVQ7 753 aa19.06■□□□□ 0.64
TTC28-204ENST00000468807 EVPLLA8MZ36 301 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 ATP6V1G2-DDX39BF2Z307 99 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 ZNF43P17038 809 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 AQP1P29972 269 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 SQLEQ14534 574 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 C11orf71Q6IPW1 123 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 PRIMA1Q86XR5 153 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 OR1K1Q8NGR3 316 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 SLC35B4Q969S0 331 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 PTDSS2Q9BVG9 487 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 SEC14L4Q9UDX3 406 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 SLC13A4Q9UKG4 626 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 MOKQ9UQ07 419 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 ABCA1O95477 2261 aa19.05■□□□□ 0.64
TTC28-204ENST00000468807 A0A1B0GWA3 101 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 OR6C65A6NJZ3 312 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 FTCDNL1E5RQL4 147 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 UPK3AO75631 287 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 CBLP22681 906 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 SLC6A2P23975 617 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 HTR2AP28223 471 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 CLDN17P56750 224 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 UBE2NP61088 152 aaKnown RBP19.04■□□□□ 0.64
TTC28-204ENST00000468807 EGR4Q05215 589 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 KRTAP1-1Q07627 177 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 C1DQ13901 141 aaKnown RBP19.04■□□□□ 0.64
TTC28-204ENST00000468807 SCARB2Q14108 478 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 TBRG1Q3YBR2 411 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 ALG10BQ5I7T1 473 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 HMBOX1Q6NT76 420 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 ZNF544Q6NX49 715 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 CLEC2AQ6UVW9 174 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 KCNS3Q9BQ31 491 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 PRR14Q9BWN1 585 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 IKZF5Q9H5V7 419 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 INTS9Q9NV88 658 aaKnown RBP19.04■□□□□ 0.64
TTC28-204ENST00000468807 SELENONQ9NZV5 590 aa19.04■□□□□ 0.64
TTC28-204ENST00000468807 CORO2BQ9UQ03 480 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms