RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 NIPAL3Q6P499 406 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 SEZ6L2Q6UXD5 910 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 PATL1Q86TB9 770 aaKnown RBP10.16□□□□□ -0.78
CDHR3-205ENST00000468143 RANBP3LQ86VV4 465 aaPredicted RBP10.16□□□□□ -0.78
CDHR3-205ENST00000468143 EPHX4Q8IUS5 362 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 BHLHE22Q8NFJ8 381 aaPredicted RBP10.16□□□□□ -0.78
CDHR3-205ENST00000468143 OR6T1Q8NGN1 323 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 DNAJA4Q8WW22 397 aaPredicted RBP10.16□□□□□ -0.78
CDHR3-205ENST00000468143 SLC38A4Q969I6 547 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 PIGTQ969N2 578 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 TMEM45BQ96B21 275 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 TAMM41Q96BW9 452 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 RCN3Q96D15 328 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 ARHGDIGQ99819 225 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 SH3GL1Q99961 368 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 USB1Q9BQ65 265 aaKnown RBP10.16□□□□□ -0.78
CDHR3-205ENST00000468143 C12orf10Q9HB07 376 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 NGBQ9NPG2 151 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 TAS2R16Q9NYV7 291 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 NPAP1Q9NZP6 1156 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 RASD1Q9Y272 281 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 RNF115Q9Y4L5 304 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 CAPN7Q9Y6W3 813 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 OTOGQ6ZRI0 2925 aa10.16□□□□□ -0.78
CDHR3-205ENST00000468143 TRAV36DV7A0A075B6V5 113 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 A0A0B4J2E0 115 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 A0A1B0GX12 115 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 BBIP1A8MTZ0 92 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 LRRN3E7EW58 273 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 M0R082 166 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 PDLIM1O00151 329 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 HS3ST1O14792 307 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 OR2T1O43869 369 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 KRT33AO76009 404 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 VAMP5O95183 116 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 TNFRSF1BP20333 461 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 GRPRP30550 384 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 HOXC12P31275 282 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 CRYBA2P53672 197 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 CLDN17P56750 224 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 FOXD4Q12950 439 aaPredicted RBP10.15□□□□□ -0.78
CDHR3-205ENST00000468143 COQ5Q5HYK3 327 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ENTPD8Q5MY95 495 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 FAM69AQ5T7M9 428 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 INTS11Q5TA45 600 aaKnown RBP10.15□□□□□ -0.78
CDHR3-205ENST00000468143 FAM91A1Q658Y4 838 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ADAM5Q6NVV9 412 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 C20orf204Q6ZNR8 217 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 CALHM3Q86XJ0 350 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 SLC30A8Q8IWU4 369 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 C10orf53Q8N6V4 93 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 WDR31Q8NA23 367 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 PCYOX1LQ8NBM8 494 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 KBTBD8Q8NFY9 601 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 OR8J3Q8NGG0 315 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ZNF417Q8TAU3 575 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 PERPQ96FX8 193 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ZNF583Q96ND8 569 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 MUS81Q96NY9 551 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ZNF587Q96SQ5 575 aaPredicted RBP10.15□□□□□ -0.78
CDHR3-205ENST00000468143 ELAC2Q9BQ52 826 aaKnown RBP10.15□□□□□ -0.78
CDHR3-205ENST00000468143 TMUB1Q9BVT8 246 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 SLCO5A1Q9H2Y9 848 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 MRGBPQ9NV56 204 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 GID8Q9NWU2 228 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 GMPR2Q9P2T1 348 aaKnown RBP10.15□□□□□ -0.78
CDHR3-205ENST00000468143 SLC25A15Q9Y619 301 aa10.15□□□□□ -0.78
CDHR3-205ENST00000468143 SPG11Q96JI7 2443 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 MS4A18H0YCH9 400 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 M0R1B8 84 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 AIM2O14862 343 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 SHOX2O60902 331 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 UPK3AO75631 287 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 NPPAP01160 153 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 THY1P04216 161 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 C8BP07358 591 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 NQO1P15559 274 aaKnown RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF43P17038 809 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 GYS2P54840 703 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 C1DQ13901 141 aaKnown RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 NRF1Q16656 503 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 MS4A18Q3C1V0 323 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 WDR88Q6ZMY6 472 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 H1FNTQ75WM6 255 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 CCDC80Q76M96 950 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 TSPYL5Q86VY4 417 aaPredicted RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 P2RY8Q86VZ1 359 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 KRTAP1-3Q8IUG1 177 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 ZNF611Q8N823 705 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 OXGR1Q96P68 337 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 MOGAT1Q96PD6 335 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 FAM107BQ9H098 131 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 EVA1AQ9H8M9 152 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 B3GAT1Q9P2W7 334 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 LAMP3Q9UQV4 416 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 SH3GLB1Q9Y371 365 aa10.14□□□□□ -0.79
CDHR3-205ENST00000468143 PRRC2AP48634 2157 aaKnown RBP10.14□□□□□ -0.79
CDHR3-205ENST00000468143 CCDC168Q8NDH2 2452 aa10.13□□□□□ -0.79
CDHR3-205ENST00000468143 ABCD4O14678 606 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms