RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 OR6C65A6NJZ3 312 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 H7C1Q1 480 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 OVOL3O00110 214 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ABCD4O14678 606 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 SOD3P08294 240 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 C6orf89Q6UWU4 347 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 AAED1Q7RTV5 226 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 LSMEM1Q8N8F7 131 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ZIC4Q8N9L1 334 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 OR52E4Q8NGH9 312 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 OR52N5Q8NH56 324 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 BCAS4Q8TDM0 211 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 DNAJA4Q8WW22 397 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 GTPBP3Q969Y2 492 aaKnown RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 GRIP2Q9C0E4 1043 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 SLCO5A1Q9H2Y9 848 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 EVA1AQ9H8M9 152 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 SLC7A10Q9NS82 523 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 MRGBPQ9NV56 204 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 CISD1Q9NZ45 108 aaKnown RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 LEF1Q9UJU2 399 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 RASD1Q9Y272 281 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 ARL2BPQ9Y2Y0 163 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 MAGED1Q9Y5V3 778 aaPredicted RBP16.78■□□□□ 0.28
COL7A1-207ENST00000467985 PLCE1Q9P212 2302 aa16.78■□□□□ 0.28
COL7A1-207ENST00000467985 SHISA9B4DS77 424 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 SERPINB7O75635 380 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 HEXAP06865 529 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 PNMTP11086 282 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 GTF2E2P29084 291 aaKnown RBP16.77■□□□□ 0.28
COL7A1-207ENST00000467985 MPGP29372 298 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 CDH11P55287 796 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 HOXC5Q00444 222 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 SCARB2Q14108 478 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 TSPO2Q5TGU0 170 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 DEPDC4Q8N2C3 294 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 ANKS4BQ8N8V4 417 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 CCDC197Q8NCU1 140 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 NEUROG1Q92886 237 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 SMR3AQ99954 134 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 ALG2Q9H553 416 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 AMDHD2Q9Y303 409 aa16.77■□□□□ 0.28
COL7A1-207ENST00000467985 ANGPT2O15123 496 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 OR2T1O43869 369 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 CCDC22O60826 627 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 KRT33AO76009 404 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF83P51522 516 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 P2RY4P51582 365 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 CBX1P83916 185 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 LTBQ06643 244 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 PGGHGQ32M88 737 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 DLEU7Q6UYE1 221 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 CREB3L2Q70SY1 520 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 PIGWQ7Z7B1 504 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 DPP10Q8N608 796 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 HIPK4Q8NE63 616 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 TSPEARQ8WU66 669 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF385AQ96PM9 386 aaKnown RBP16.76■□□□□ 0.27
COL7A1-207ENST00000467985 IKZF5Q9H5V7 419 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 SLC17A5Q9NRA2 495 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 SELENONQ9NZV5 590 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 TESQ9UGI8 421 aaKnown RBP16.76■□□□□ 0.27
COL7A1-207ENST00000467985 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 ANGPT4Q9Y264 503 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 NDUFAF1Q9Y375 327 aa16.76■□□□□ 0.27
COL7A1-207ENST00000467985 TRIM64A6NGJ6 449 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 TRIM64BA6NI03 449 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 FTCDNL1E5RQL4 147 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 WNT11O96014 354 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 HOXB4P17483 251 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-207ENST00000467985 CD40P25942 277 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 FOXG1P55316 489 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-207ENST00000467985 NCALDP61601 193 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 RBBP4Q09028 425 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 ADRM1Q16186 407 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 RUNDC3AQ59EK9 446 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 C9orf135Q5VTT2 229 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 AGAP6Q5VW22 663 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 FAM91A1Q658Y4 838 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 ULK3Q6PHR2 472 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 SLC22A25Q6T423 547 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 KLHL24Q6TFL4 600 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 DHDDSQ86SQ9 333 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 DTX2Q86UW9 622 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 ARMC8Q8IUR7 673 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-207ENST00000467985 C10orf111Q8N326 155 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 CIARTQ8N365 385 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-207ENST00000467985 SLC38A4Q969I6 547 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 SLC25A36Q96CQ1 311 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 BOD1Q96IK1 185 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 CPPED1Q9BRF8 314 aaPredicted RBP16.75■□□□□ 0.27
COL7A1-207ENST00000467985 OBP2BQ9NPH6 170 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 POU2F3Q9UKI9 436 aa16.75■□□□□ 0.27
COL7A1-207ENST00000467985 A0A1B0GWA3 101 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 ZNF587BE7ETH6 402 aa16.74■□□□□ 0.27
COL7A1-207ENST00000467985 SMAD7O15105 426 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms