RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 KALRNO60229 2985 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 A8MVM7 634 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 H3BML4 177 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 RGS10O43665 173 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 EFNA2O43921 213 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 MITFO75030 526 aaPredicted RBP13.29□□□□□ -0.28
DDX56-208ENST00000467318 GADD45GO95257 159 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 HTR1AP08908 422 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 INHBBP09529 407 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 BMP7P18075 431 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
DDX56-208ENST00000467318 SERPINB10P48595 397 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 TDGF1P3P51864 188 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 HMGA2P52926 109 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 IL1RL1Q01638 556 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 SPIBQ01892 262 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 TEKQ02763 1124 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 NPRL3Q12980 569 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 MAD2L1BPQ15013 274 aaPredicted RBP13.29□□□□□ -0.28
DDX56-208ENST00000467318 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
DDX56-208ENST00000467318 ANKRD34AQ69YU3 496 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 GALNT5Q7Z7M9 940 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 STK35Q8TDR2 534 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 GIPC3Q8TF64 312 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 DDIT4LQ96D03 193 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 PRSS27Q9BQR3 290 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 TMEM43Q9BTV4 400 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 GABARAPL3Q9BY60 117 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 SLC19A3Q9BZV2 496 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 RHCGQ9UBD6 479 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
DDX56-208ENST00000467318 E9PQ18 207 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 LYPD3O95274 346 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 WISP1O95388 367 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 PRB1P04280 392 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 EDN3P14138 238 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 POU3F2P20265 443 aaPredicted RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 RRM2P31350 389 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 LHX2P50458 406 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 MLLT10P55197 1068 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 SLC35A2P78381 396 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 EMX1Q04741 257 aaPredicted RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 CRYZQ08257 329 aaKnown RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 TMED1Q13445 227 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 SYT14P1Q58G82 188 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 SYT6Q5T7P8 510 aaPredicted RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 C16orf87Q6PH81 154 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 ESPNLQ6ZVH7 1005 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 PRSS48Q7RTY5 328 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 RNF113BQ8IZP6 322 aaKnown RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 S100ZQ8WXG8 99 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 FCGR1BQ92637 280 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 TIMP4Q99727 224 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 MAN2C1Q9NTJ4 1040 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 PLCXD1Q9NUJ7 323 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 TESMINQ9Y4I5 508 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 TMEM72A0PK05 275 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 HTR3EA5X5Y0 456 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 FAM20BO75063 409 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 CPN1P15169 458 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 ZNF182P17025 639 aaPredicted RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 IL11P20809 199 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 RRM2BQ7LG56 351 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 NKAIN4Q8IVV8 208 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 PM20D2Q8IYS1 436 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 CNIH3Q8TBE1 160 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 SLC7A13Q8TCU3 470 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 TMEM239Q8WW34 195 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 ACOT11Q8WXI4 607 aaPredicted RBP13.28□□□□□ -0.28
DDX56-208ENST00000467318 PLEKHA8Q96JA3 519 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 HRASLS5Q96KN8 279 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 DGCR6LQ9BY27 220 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 POTEKPQ9BYX7 375 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 FAIMQ9NVQ4 179 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 SPRR3Q9UBC9 169 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 POFUT2Q9Y2G5 429 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 HDGFL3Q9Y3E1 203 aa13.28□□□□□ -0.28
DDX56-208ENST00000467318 COL6A6A6NMZ7 2263 aa13.27□□□□□ -0.28
DDX56-208ENST00000467318 NPIPB7O75200 414 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 IGF2P01344 180 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 ZNF708P17019 499 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 SFTPDP35247 375 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 STARP49675 285 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 EGR4Q05215 589 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 DGUOKQ16854 277 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 TMEM176BQ3YBM2 270 aaPredicted RBP13.27□□□□□ -0.29
DDX56-208ENST00000467318 DCST1Q5T197 706 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 WDR88Q6ZMY6 472 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 P3H2Q8IVL5 708 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 DEPDC4Q8N2C3 294 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 MEIOBQ8N635 442 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 ATP6V1C2Q8NEY4 427 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 OR52J3Q8NH60 311 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 MYDGFQ969H8 173 aa13.27□□□□□ -0.29
DDX56-208ENST00000467318 KLHL15Q96M94 604 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms