RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 CLPTM1O96005 669 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 H3F3AP84243 136 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 TMEM155Q4W5P6 130 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 SGO1Q5FBB7 561 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 C6orf89Q6UWU4 347 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 LRIG3Q6UXM1 1119 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 LDLRAD3Q86YD5 345 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 CCDC36Q8IYA8 594 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 C1orf52Q8N6N3 182 aaKnown RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 TMEM234Q8WY98 164 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 ST8SIA1Q92185 356 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 ATP6V1E2Q96A05 226 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 ELP4Q96EB1 424 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 THOC1Q96FV9 657 aaKnown RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 MS4A3Q96HJ5 214 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 RCC1LQ96I51 464 aaKnown RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 ZNF385AQ96PM9 386 aaKnown RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 ASCL2Q99929 193 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 NAT9Q9BTE0 207 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.73
UBR4-210ENST00000466969 TRIM15Q9C019 465 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 ALG9Q9H6U8 611 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 NMRK1Q9NWW6 199 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 GRHL1Q9NZI5 618 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 NFU1Q9UMS0 254 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 LRCH1Q9Y2L9 728 aa10.52□□□□□ -0.73
UBR4-210ENST00000466969 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 ZNF503-AS2A6NEH8 195 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 FBXO24O75426 580 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 RSL1D1O76021 490 aaKnown RBP10.51□□□□□ -0.73
UBR4-210ENST00000466969 UBOX5O94941 541 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 UROSP10746 265 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 PRPS2P11908 318 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 EFNB2P52799 333 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 SESN3P58005 492 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 SLC35A1P78382 337 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 PAX2Q02962 417 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 TBX2Q13207 712 aaPredicted RBP10.51□□□□□ -0.73
UBR4-210ENST00000466969 GTF2H2Q13888 395 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 PDE7AQ13946 482 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 PRAMEF8Q5VWM4 474 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 PRAMEF7Q5VXH5 474 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 GTF2H2CQ6P1K8 395 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 CDRT4Q8N9R6 151 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 SYNPRQ8TBG9 265 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 CDK15Q96Q40 435 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 TSPAN32Q96QS1 320 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 LMBRD1Q9NUN5 540 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 TMEM181Q9P2C4 612 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 SLC7A8Q9UHI5 535 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 VPREB3Q9UKI3 123 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 TRIM33Q9UPN9 1127 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 SIGLEC9Q9Y336 463 aa10.51□□□□□ -0.73
UBR4-210ENST00000466969 GNG14A0A1W2PPG7 69 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 TMEM229AB2RXF0 380 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 F5H0A9 414 aaPredicted RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 ZNF264O43296 627 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 EIF4E2O60573 245 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 VSIG10L2P0DP72 767 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 ATP6V1C1P21283 382 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 IVDP26440 423 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 FKBP2P26885 142 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 NTSP30990 170 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 APOBEC1P41238 236 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 FGF12P61328 243 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 ARF1P84077 181 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 ROR2Q01974 943 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 ZNF763Q0D2J5 394 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 MOGQ16653 247 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 KLHL26Q53HC5 615 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 CCNJQ5T5M9 372 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 RNASEH2BQ5TBB1 312 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 C1orf122Q6ZSJ8 110 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 LINGO2Q7L985 606 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 GOLGA7Q7Z5G4 137 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 ZNF614Q8N883 585 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 COX18Q8N8Q8 333 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 ZIC4Q8N9L1 334 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 PAPD5Q8NDF8 572 aaKnown RBP10.5□□□□□ -0.73
UBR4-210ENST00000466969 OR9K2Q8NGE7 335 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 KIF18AQ8NI77 898 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 TSPAN17Q96FV3 270 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 HES6Q96HZ4 224 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 CHID1Q9BWS9 393 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 EGLN1Q9GZT9 426 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 HOXD1Q9GZZ0 328 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 ELOVL6Q9H5J4 265 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 CHRNA9Q9UGM1 479 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 TRAPPC4Q9Y296 219 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 PSAT1Q9Y617 370 aa10.5□□□□□ -0.73
UBR4-210ENST00000466969 UPK3AO75631 287 aa10.49□□□□□ -0.73
UBR4-210ENST00000466969 OR8G3PP0DMU2 310 aa10.49□□□□□ -0.73
UBR4-210ENST00000466969 CD79AP11912 226 aa10.49□□□□□ -0.73
UBR4-210ENST00000466969 MAP3K8P41279 467 aa10.49□□□□□ -0.73
UBR4-210ENST00000466969 CLK1P49759 484 aaKnown RBP10.49□□□□□ -0.73
UBR4-210ENST00000466969 SELENOPP49908 381 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms