RNA–Protein interactions for RNA: ENST00000466957.1

SLF1-203, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 5

Gene SLF1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-203ENST00000466957 TMEM117Q9H0C3 514 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 NT5C3AQ9H0P0 336 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 BOLA2Q9H3K6 86 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 CLMPQ9H6B4 373 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 EXOSC3Q9NQT5 275 aaKnown RBP3.01□□□□□ -1.93
SLF1-203ENST00000466957 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.01□□□□□ -1.93
SLF1-203ENST00000466957 CNOT2Q9NZN8 540 aaKnown RBP3.01□□□□□ -1.93
SLF1-203ENST00000466957 IL20RAQ9UHF4 553 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 HOOK1Q9UJC3 728 aaKnown RBP3.01□□□□□ -1.93
SLF1-203ENST00000466957 FZR1Q9UM11 496 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 FKBP7Q9Y680 259 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 EML5Q05BV3 1969 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 LRBAP50851 2863 aa3.01□□□□□ -1.93
SLF1-203ENST00000466957 PLIN4Q96Q06 1357 aa3□□□□□ -1.93
SLF1-203ENST00000466957 COL6A6A6NMZ7 2263 aa3□□□□□ -1.93
SLF1-203ENST00000466957 GOLGA4Q13439 2230 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 WDR19Q8NEZ3 1342 aa3□□□□□ -1.93
SLF1-203ENST00000466957 POLQO75417 2590 aa3□□□□□ -1.93
SLF1-203ENST00000466957 TRBV7-9A0A0J9YWB2 115 aa3□□□□□ -1.93
SLF1-203ENST00000466957 RNF103-CHMP3A0A140T963 221 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ERICH4A6NGS2 130 aa3□□□□□ -1.93
SLF1-203ENST00000466957 FBLL1A6NHQ2 334 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 E9PMD0 336 aa3□□□□□ -1.93
SLF1-203ENST00000466957 SGK494L7N484 410 aa3□□□□□ -1.93
SLF1-203ENST00000466957 SEC22BO75396 215 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ADCY5O95622 1261 aa3□□□□□ -1.93
SLF1-203ENST00000466957 SLC35G4P0C7Q5 338 aa3□□□□□ -1.93
SLF1-203ENST00000466957 PDHBP11177 359 aa3□□□□□ -1.93
SLF1-203ENST00000466957 RALAP11233 206 aa3□□□□□ -1.93
SLF1-203ENST00000466957 H2AFXP16104 143 aaPredicted RBP3□□□□□ -1.93
SLF1-203ENST00000466957 CSRP1P21291 193 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 PTPN6P29350 595 aa3□□□□□ -1.93
SLF1-203ENST00000466957 POU3F4P49335 361 aa3□□□□□ -1.93
SLF1-203ENST00000466957 STK19P49842 368 aaPredicted RBP3□□□□□ -1.93
SLF1-203ENST00000466957 RAG2P55895 527 aa3□□□□□ -1.93
SLF1-203ENST00000466957 PFN3P60673 137 aa3□□□□□ -1.93
SLF1-203ENST00000466957 NOP14P78316 857 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 ZP4Q12836 540 aa3□□□□□ -1.93
SLF1-203ENST00000466957 EIF2B1Q14232 305 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 ZSCAN26Q16670 478 aa3□□□□□ -1.93
SLF1-203ENST00000466957 KCTD19Q17RG1 926 aaPredicted RBP3□□□□□ -1.93
SLF1-203ENST00000466957 CCDC183Q5T5S1 534 aa3□□□□□ -1.93
SLF1-203ENST00000466957 Q6ZS52 159 aa3□□□□□ -1.93
SLF1-203ENST00000466957 FAM228AQ86W67 206 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ECHDC2Q86YB7 292 aa3□□□□□ -1.93
SLF1-203ENST00000466957 KDM8Q8N371 416 aa3□□□□□ -1.93
SLF1-203ENST00000466957 HDDC3Q8N4P3 179 aa3□□□□□ -1.93
SLF1-203ENST00000466957 RNF148Q8N7C7 305 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ARIH2OSQ8N7S6 290 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ANKRD20A12PQ8NF67 263 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ITFG1Q8TB96 612 aa3□□□□□ -1.93
SLF1-203ENST00000466957 ANKRD49Q8WVL7 239 aa3□□□□□ -1.93
SLF1-203ENST00000466957 SLC25A36Q96CQ1 311 aa3□□□□□ -1.93
SLF1-203ENST00000466957 IL4I1Q96RQ9 567 aa3□□□□□ -1.93
SLF1-203ENST00000466957 EDEM2Q9BV94 578 aa3□□□□□ -1.93
SLF1-203ENST00000466957 TM2D1Q9BX74 207 aa3□□□□□ -1.93
SLF1-203ENST00000466957 NMNAT2Q9BZQ4 307 aa3□□□□□ -1.93
SLF1-203ENST00000466957 GLT8D2Q9H1C3 349 aa3□□□□□ -1.93
SLF1-203ENST00000466957 DDX19BQ9UMR2 479 aa3□□□□□ -1.93
SLF1-203ENST00000466957 PLA2G4CQ9UP65 541 aa3□□□□□ -1.93
SLF1-203ENST00000466957 GINS2Q9Y248 185 aa3□□□□□ -1.93
SLF1-203ENST00000466957 RRP15Q9Y3B9 282 aaKnown RBP3□□□□□ -1.93
SLF1-203ENST00000466957 SETD2Q9BYW2 2564 aaPredicted RBP3□□□□□ -1.93
SLF1-203ENST00000466957 C2CD3Q4AC94 2353 aa3□□□□□ -1.93
SLF1-203ENST00000466957 MTCL1Q9Y4B5 1905 aaKnown RBP2.99□□□□□ -1.93
SLF1-203ENST00000466957 NUP205Q92621 2012 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 SNAI2O43623 268 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 SDC3O75056 442 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 ZNF254O75437 659 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 MT-ATP6P00846 226 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 ZCCHC18P0CG32 403 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 HSPD1P10809 573 aaKnown RBP2.99□□□□□ -1.93
SLF1-203ENST00000466957 DESP17661 470 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 PRDX6P30041 224 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 PRDX2P32119 198 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 RABIFP47224 123 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 SLC11A1P49279 550 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 FUT7Q11130 342 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 SULT1C3Q6IMI6 304 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 UFSP1Q6NVU6 142 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 CASC1Q6TDU7 716 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 ISLR2Q6UXK2 745 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 SYT10Q6XYQ8 523 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 P4HA3Q7Z4N8 544 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 NET1Q7Z628 596 aaPredicted RBP2.99□□□□□ -1.93
SLF1-203ENST00000466957 ZNF589Q86UQ0 364 aaPredicted RBP2.99□□□□□ -1.93
SLF1-203ENST00000466957 EFCAB13Q8IY85 973 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 CCDC36Q8IYA8 594 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 LRRC43Q8N309 656 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 ARFGAP2Q8N6H7 521 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 OTUD6BQ8N6M0 293 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 MINDY2Q8NBR6 621 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 FAM71CQ8NEG0 241 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 OR56B1Q8NGI3 324 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 FGF13Q92913 245 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 ITFG2Q969R8 447 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 NCLNQ969V3 563 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 DNAJA3Q96EY1 480 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 C14orf79Q96F83 325 aa2.99□□□□□ -1.93
SLF1-203ENST00000466957 CARD6Q9BX69 1037 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms