RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GRPRP30550 384 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 SLC16A1P53985 500 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 RPS4XP62701 263 aaKnown RBP13.57□□□□□ -0.24
NPHP4-205ENST00000466897 POU4F3Q15319 338 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 IGFBP7Q16270 282 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 TMEM211Q6ICI0 200 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 OR2A2Q6IF42 318 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 PGBD2Q6P3X8 592 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 H1FNTQ75WM6 255 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-205ENST00000466897 FCRLAQ7L513 359 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 ZER1Q7Z7L7 766 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 HIPK1Q86Z02 1210 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 PQLC1Q8N2U9 271 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 OR5J2Q8NH18 312 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 OR5K1Q8NHB7 308 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 GIPC3Q8TF64 312 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 TTYH2Q9BSA4 534 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
NPHP4-205ENST00000466897 SF3B5Q9BWJ5 86 aaKnown RBP13.57□□□□□ -0.24
NPHP4-205ENST00000466897 OSBPL10Q9BXB5 764 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 DGCR6LQ9BY27 220 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 CHST11Q9NPF2 352 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 C6orf203Q9P0P8 240 aaPredicted RBP13.57□□□□□ -0.24
NPHP4-205ENST00000466897 KLHL9Q9P2J3 617 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 MGAT4BQ9UQ53 548 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 OSGIN2Q9Y236 505 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 RASD1Q9Y272 281 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 HIF3AQ9Y2N7 669 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 MEMO1Q9Y316 297 aa13.57□□□□□ -0.24
NPHP4-205ENST00000466897 IGKV3D-15A0A087WSY6 115 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 TRGV8A0A0C4DH27 118 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 EFCAB9A8MZ26 197 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 M0R082 166 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 AQP8O94778 261 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 AKR7A3O95154 331 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 RCBTB2O95199 551 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 TGM6O95932 706 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 ADAP00813 363 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 CRHP06850 196 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 FUT1P19526 365 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 MAKP20794 623 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 CBLP22681 906 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 GNLYP22749 145 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 CEACAM8P31997 349 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-205ENST00000466897 GSSP48637 474 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 IST1P53990 364 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 ZP4Q12836 540 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 FOXD4Q12950 439 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-205ENST00000466897 TSPAN31Q12999 210 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 OTUD3Q5T2D3 398 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-205ENST00000466897 RIPPLY2Q5TAB7 128 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 EEF1A1P5Q5VTE0 462 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 CD300LDQ6UXZ3 194 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 SEM1Q6ZVN7 128 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 TMEM179BQ7Z7N9 219 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 AMIGO2Q86SJ2 522 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 ZDHHC13Q8IUH4 622 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 C10orf53Q8N6V4 93 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 TMEM99Q8N816 258 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 OR10G2Q8NGC3 310 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF417Q8TAU3 575 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 GNPDA2Q8TDQ7 276 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 DNAJC9Q8WXX5 260 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 SLC25A36Q96CQ1 311 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF587Q96SQ5 575 aaPredicted RBP13.56□□□□□ -0.24
NPHP4-205ENST00000466897 PKP2Q99959 881 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 GABARAPL1Q9H0R8 117 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 BCO1Q9HAY6 547 aa13.56□□□□□ -0.24
NPHP4-205ENST00000466897 RP1L1Q8IWN7 2480 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF716A6NP11 495 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 ZNF814B7Z6K7 855 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 LRRN3E7EW58 273 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PLPP3O14495 311 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 CDC42EP2O14613 210 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 HIST1H2ABP04908 130 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 GLI4P10075 376 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 SAGP10523 405 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 ANXA8P13928 327 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 UQCRC1P31930 480 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 GPR4P46093 362 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 UQCRFS1P47985 274 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PUDPQ08623 228 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PPP1R8Q12972 351 aaKnown RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PMS2P3Q13401 168 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 SLC17A1Q14916 467 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 GUSBP1Q15486 140 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 C4orf17Q53FE4 359 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 MTFR2Q6P444 385 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 HIST3H2AQ7L7L0 130 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 P4HA3Q7Z4N8 544 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 PXKQ7Z7A4 578 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 OAFQ86UD1 273 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 LSRQ86X29 649 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-205ENST00000466897 C9orf106Q8NAJ2 232 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 AQP11Q8NBQ7 271 aa13.55□□□□□ -0.24
NPHP4-205ENST00000466897 OR9Q2Q8NGE9 314 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms