RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 SSR4P51571 173 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TPBGQ13641 420 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 EFR3AQ14156 821 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ACER2Q5QJU3 275 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 ACSM5Q6NUN0 579 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 H3F3CQ6NXT2 135 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 MDGA2Q7Z553 956 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TEX12Q9BXU0 123 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 TBC1D24Q9ULP9 559 aa16.92■□□□□ 0.3
CAPN3-209ENST00000466222 CHCHD2Q9Y6H1 151 aaPredicted RBP16.92■□□□□ 0.3
CAPN3-209ENST00000466222 PIEZO1Q92508 2521 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 A0A1B0GWA3 101 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 KDM4EB2RXH2 506 aaPredicted RBP16.91■□□□□ 0.3
CAPN3-209ENST00000466222 G3V3Y1 287 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 GNB5O14775 395 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 TLX3O43711 291 aaPredicted RBP16.91■□□□□ 0.3
CAPN3-209ENST00000466222 LCN1P31025 176 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 SLC9A3P48764 834 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 GAS1P54826 345 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 ST3GAL3Q11203 375 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 LIPKQ5VXJ0 399 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 NUP54Q7Z3B4 507 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 ARMC10Q8N2F6 343 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 TMEM156Q8N614 296 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 TOR1AIP2Q8NFQ8 470 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 AP3S1Q92572 193 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 GPA33Q99795 319 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 PRSS27Q9BQR3 290 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 SRRQ9GZT4 340 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 ERVK13-1Q9NX77 482 aa16.91■□□□□ 0.3
CAPN3-209ENST00000466222 A0A1W2PQD3 144 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 CCL3P10147 92 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 GAAP10253 952 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ETV1P50549 477 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 XKRXQ6PP77 449 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 BEST3Q8N1M1 668 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 TRMT61AQ96FX7 289 aaKnown RBP16.9■□□□□ 0.3
CAPN3-209ENST00000466222 KCTD7Q96MP8 289 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 COQ7Q99807 217 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ATP13A2Q9NQ11 1180 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 MED17Q9NVC6 651 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 KLRF1Q9NZS2 232 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ICAM5Q9UMF0 924 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 TRAPPC13A5PLN9 417 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 CDRT1O95170 752 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 OR5F1O95221 314 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ITPKBP27987 946 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 OR2B6P58173 313 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 SCN1BQ07699 218 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 NDUFA5Q16718 116 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ARMC4Q5T2S8 1044 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF550Q7Z398 422 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 BCDIN3DQ7Z5W3 292 aaKnown RBP16.9■□□□□ 0.3
CAPN3-209ENST00000466222 KIF18BQ86Y91 864 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 UBQLNLQ8IYU4 475 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 GDPD1Q8N9F7 314 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 PIGXQ8TBF5 258 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 UFD1Q92890 307 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 RFKQ969G6 155 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 RNFT2Q96EX2 444 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 ZNF559Q9BR84 538 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 METTL7AQ9H8H3 244 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 STMN3Q9NZ72 180 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 GSTK1Q9Y2Q3 226 aa16.9■□□□□ 0.3
CAPN3-209ENST00000466222 SPIN1Q9Y657 262 aaPredicted RBP16.9■□□□□ 0.3
CAPN3-209ENST00000466222 A0A0B4J2E0 115 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 A0A1B0GX12 115 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 PIP5K1CO60331 668 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 FMO6PO60774 539 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 TRAPPC2P0DI81 140 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 TRAPPC2BP0DI82 140 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 PAQR6Q6TCH4 344 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 OPN5Q6U736 354 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 LSMEM1Q8N8F7 131 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 CLEC1AQ8NC01 280 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 RNF138Q8WVD3 245 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 TTC9Q92623 222 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 SPENQ96T58 3664 aaKnown RBP16.89■□□□□ 0.29
CAPN3-209ENST00000466222 NPAS1Q99742 590 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 TMEM27Q9HBJ8 222 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 C14orf119Q9NWQ9 140 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 MED11Q9P086 117 aa16.89■□□□□ 0.29
CAPN3-209ENST00000466222 MGAQ8IWI9 3026 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 CDC40O60508 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 CCNKO75909 580 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 NUDT14O95848 222 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 KRT8P05787 483 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 FGF9P31371 208 aaPredicted RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 GABRA5P31644 462 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 RPS5P46782 204 aaKnown RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 MTNR1AP48039 350 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 AIMP2Q13155 320 aaKnown RBP16.88■□□□□ 0.29
CAPN3-209ENST00000466222 GPR50Q13585 617 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF79Q15937 498 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 TMEM53Q6P2H8 277 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 LINC00696Q6ZRV3 163 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 RRM2BQ7LG56 351 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 ZNF227Q86WZ6 799 aa16.88■□□□□ 0.29
CAPN3-209ENST00000466222 LAX1Q8IWV1 398 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms