RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 FBXO17Q96EF6 278 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 TEX37Q96LM6 180 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 CCDC115Q96NT0 180 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 TRNT1Q96Q11 434 aaKnown RBP8.46□□□□□ -1.06
USP39-212ENST00000465514 SNX18Q96RF0 628 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 SORT1Q99523 831 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 PKP2Q99959 881 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 NUF2Q9BZD4 464 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 MTHFD2LQ9H903 347 aaPredicted RBP8.46□□□□□ -1.06
USP39-212ENST00000465514 BTNL2Q9UIR0 455 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 MOKQ9UQ07 419 aa8.46□□□□□ -1.06
USP39-212ENST00000465514 CCDC154A6NI56 674 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 LIPT2A6NK58 231 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 E9PBE3 544 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 FAAHO00519 579 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 KLF11O14901 512 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 BIRC5O15392 142 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 AKR7A3O95154 331 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 WNT11O96014 354 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 NR2F1P10589 423 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 IL7RP16871 459 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 PCMT1P22061 227 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 RPS4Y1P22090 263 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 CXCR1P25024 350 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 RBMXP38159 391 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 CDKN2CP42773 168 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 SLC1A6P48664 564 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 MAP2K6P52564 334 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 CHN2P52757 468 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 DVL1P1P54792 670 aaPredicted RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 UFM1P61960 85 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 EPS8Q12929 822 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 GNA13Q14344 377 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 OR7A5Q15622 319 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 SWI5Q1ZZU3 235 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 HIKESHIQ53FT3 197 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 COX20Q5RI15 118 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 MRPL2Q5T653 305 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 SHQ1Q6PI26 577 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 KLHL24Q6TFL4 600 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 ZNF621Q6ZSS3 439 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 AAED1Q7RTV5 226 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 ANKS4BQ8N8V4 417 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 POMGNT2Q8NAT1 580 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 OR9K2Q8NGE7 335 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 AENQ8WTP8 325 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 HPS1Q92902 700 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 TMEM45BQ96B21 275 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 AURKBQ96GD4 344 aaPredicted RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 ZNF385AQ96PM9 386 aaKnown RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 PANX1Q96RD7 426 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 JMJD8Q96S16 334 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 TMEM109Q9BVC6 243 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 MYOZ1Q9NP98 299 aaPredicted RBP8.45□□□□□ -1.06
USP39-212ENST00000465514 ESM1Q9NQ30 184 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 PNPOQ9NVS9 261 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 RLIMQ9NVW2 624 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 USP22Q9UPT9 525 aa8.45□□□□□ -1.06
USP39-212ENST00000465514 WNK2Q9Y3S1 2297 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 IGHV1-18A0A0C4DH31 117 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 AQP7P3A6NL99 342 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 C3orf80F5H4A9 247 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 KRT33AO76009 404 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 SNUPNO95149 360 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 GSNP06396 782 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 GPIP06744 558 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 DBIP07108 87 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 TACSTD2P09758 323 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 GKN3PP0CG01 181 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 UQCRBP14927 111 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 EPHA1P21709 976 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 BGNP21810 368 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 IL12AP29459 219 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 ANXA11P50995 505 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 TXNL4AP83876 142 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 FOXL1Q12952 345 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 BNIP2Q12982 314 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 CCNIQ14094 377 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 GSTA3Q16772 222 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 GPAT4Q86UL3 456 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 PEX5LQ8IYB4 626 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 ZNF440Q8IYI8 595 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 LRRC34Q8IZ02 419 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 CADM2Q8N3J6 435 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 TRIML2Q8N7C3 387 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 PNPT1Q8TCS8 783 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 BOD1Q96IK1 185 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 OR52E6Q96RD3 313 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 SF3B5Q9BWJ5 86 aaKnown RBP8.44□□□□□ -1.06
USP39-212ENST00000465514 MEAF6Q9HAF1 191 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 TMEM45AQ9NWC5 275 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 MED29Q9NX70 200 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 HAO1Q9UJM8 370 aa8.44□□□□□ -1.06
USP39-212ENST00000465514 CDHR4A6H8M9 788 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 RGS16O15492 202 aaPredicted RBP8.43□□□□□ -1.06
USP39-212ENST00000465514 LILRA1O75019 489 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 LGI1O95970 557 aa8.43□□□□□ -1.06
USP39-212ENST00000465514 ALDOCP09972 364 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms