RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 NOSIPQ9Y314 301 aaKnown RBP10.34□□□□□ -0.75
CUX1-207ENST00000465461 FLVCR1Q9Y5Y0 555 aa10.34□□□□□ -0.75
CUX1-207ENST00000465461 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 TUBAL3A6NHL2 446 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 GMNNO75496 209 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 OR5F1O95221 314 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 CH25HO95992 272 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 HPRP00739 348 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 ADAP00813 363 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 IFNW1P05000 195 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 ATP6V1B2P21281 511 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 CCKARP32238 428 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 UGT2B10P36537 528 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 OR3A2P47893 321 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 SLC16A1P53985 500 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 FOXG1P55316 489 aaPredicted RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 MS4A2Q01362 244 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 IL1RL1Q01638 556 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 LGALS3BPQ08380 585 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 PDK3Q15120 406 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 FXNQ16595 210 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 CXorf67Q86X51 503 aaPredicted RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 ZNF100Q8IYN0 542 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 OR9K2Q8NGE7 335 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 GEMIN6Q8WXD5 167 aaKnown RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 ZC3HAV1LQ96H79 300 aaKnown RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 PRRC1Q96M27 445 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 NSMCE2Q96MF7 247 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 WFIKKN1Q96NZ8 548 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 EPYCQ99645 322 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 TMEM43Q9BTV4 400 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 THTPAQ9BU02 230 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 GORASP2Q9H8Y8 452 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 GP6Q9HCN6 339 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 C20orf141Q9NUB4 165 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 ELOVL5Q9NYP7 299 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 MAGEL2Q9UJ55 1249 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 FOXD3Q9UJU5 478 aaPredicted RBP10.33□□□□□ -0.76
CUX1-207ENST00000465461 FREM1Q5H8C1 2179 aa10.33□□□□□ -0.76
CUX1-207ENST00000465461 ENO4A6NNW6 628 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 MS4A18H0YCH9 400 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 OR2T1O43869 369 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 MRPL33O75394 65 aaKnown RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 HLA-DOBP13765 273 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 NQO1P15559 274 aaKnown RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 FUT1P19526 365 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 KRTAP10-9P60411 292 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 VLDLRP98155 873 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 ZNF74Q16587 644 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 MS4A18Q3C1V0 323 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 C9orf135Q5VTT2 229 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 TBPL2Q6SJ96 375 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 CASP12Q6UXS9 341 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 STAC2Q6ZMT1 411 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 BEND4Q6ZU67 534 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 CREB3L2Q70SY1 520 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 H1FNTQ75WM6 255 aaPredicted RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 AAED1Q7RTV5 226 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 STK32CQ86UX6 486 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 KIF18BQ86Y91 864 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 EPHX4Q8IUS5 362 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 WDFY1Q8IWB7 410 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 GABRG1Q8N1C3 465 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 UBE2J2Q8N2K1 259 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 TMEM239Q8WW34 195 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 SLC7A6OSQ96CW6 309 aaPredicted RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 PYURFQ96I23 114 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 TACO1Q9BSH4 297 aaKnown RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 ZNF426Q9BUY5 554 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 FNDC11Q9BVV2 318 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 MAN2C1Q9NTJ4 1040 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 EMC3Q9P0I2 261 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 B3GAT1Q9P2W7 334 aa10.32□□□□□ -0.76
CUX1-207ENST00000465461 SAMD4AQ9UPU9 718 aaKnown RBP10.32□□□□□ -0.76
CUX1-207ENST00000465461 PKDREJQ9NTG1 2253 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SH3D21A4FU49 640 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 C11orf98E9PRG8 122 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 C16orf97H3BN30 126 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 GPR171O14626 319 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 GYG2O15488 501 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SERPINI2O75830 405 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 LYZL6O75951 148 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 PRSS23O95084 383 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 UMPSP11172 480 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 IGHV1-2P23083 117 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 AHCYP23526 432 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SELENOPP49908 381 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 CLDN17P56750 224 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 TLE4Q04727 773 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 ST3GAL3Q11203 375 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 PMS2P3Q13401 168 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 POU4F3Q15319 338 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 TSPO2Q5TGU0 170 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 NIPAL3Q6P499 406 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 C5orf46Q6UWT4 87 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 SLC46A3Q7Z3Q1 461 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 APH1AQ96BI3 265 aa10.31□□□□□ -0.76
CUX1-207ENST00000465461 CCDC124Q96CT7 223 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms