RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PCMT1P22061 227 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 GSTT1P30711 240 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 PLAURQ03405 335 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 EFR3AQ14156 821 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 ALG10BQ5I7T1 473 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 FNDC7Q5VTL7 733 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 GTF2IRD2BQ6EKJ0 949 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 GTF2IRD2Q86UP8 949 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 CLVS1Q8IUQ0 354 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-215ENST00000465457 MISPQ8IVT2 679 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 CCDC103Q8IW40 242 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-215ENST00000465457 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 POGLUT1Q8NBL1 392 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 OR52L1Q8NGH7 329 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 OR5L2Q8NGL0 311 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 OR4C3Q8NH37 302 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 RAB2BQ8WUD1 216 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 LPAR4Q99677 370 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 DOK1Q99704 481 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 PRR14Q9BWN1 585 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 C12orf10Q9HB07 376 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 STMN3Q9NZ72 180 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 CNIH4Q9P003 139 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-215ENST00000465457 BAIAP2Q9UQB8 552 aa12.52□□□□□ -0.41
HDAC6-215ENST00000465457 FBN1P35555 2871 aaKnown RBP12.52□□□□□ -0.41
HDAC6-215ENST00000465457 H3BSA7 217 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF264O43296 627 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 EIF4E2O60573 245 aaKnown RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 HCN1O60741 890 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 REM1O75628 298 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 TRMUO75648 421 aaKnown RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 TOXO94900 526 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 NAGAP17050 411 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 MSX1P28360 303 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 ADAM8P78325 824 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 EMX1Q04741 257 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 SMN1Q16637 294 aaKnown RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 SYT6Q5T7P8 510 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 UBE2UQ5VVX9 321 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 RNLSQ5VYX0 342 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 TUBA3EQ6PEY2 450 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 HSDL2Q6YN16 418 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF321PQ8N8H1 164 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 OR2T33Q8NG76 320 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 RFKQ969G6 155 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 TMIGD2Q96BF3 282 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 EFHD2Q96C19 240 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-215ENST00000465457 ISOC1Q96CN7 298 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 BPIFA2Q96DR5 249 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 PLEKHA8Q96JA3 519 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 CDCA4Q9BXL8 241 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 RACGAP1Q9H0H5 632 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 PLEKHA6Q9Y2H5 1048 aa12.51□□□□□ -0.41
HDAC6-215ENST00000465457 LOC102723996A0A087X1L8 192 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 OR6C70A6NIJ9 312 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 GTPBP1O00178 669 aaKnown RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TSPAN2O60636 221 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 MT-ND2P03891 347 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 IFI30P13284 250 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 BMP7P18075 431 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 GRK5P34947 590 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 SLC15A1P46059 708 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 SLC9A3P48764 834 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TMED10P49755 219 aaKnown RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 NR0B1P51843 470 aaKnown RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 RNF4P78317 190 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 MYBPHQ13203 477 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 SKP2Q13309 424 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 KRTCAP3Q53RY4 240 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TMEM236Q5W0B7 351 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 LINC00114Q6XXX2 140 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 LANCL3Q6ZV70 420 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 CPEB2Q7Z5Q1 589 aaKnown RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 KIF18BQ86Y91 864 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 ERI1Q8IV48 349 aaKnown RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 NFAM1Q8NET5 270 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-215ENST00000465457 WFDC11Q8NEX6 87 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TMEM163Q8TC26 289 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 RNF217Q8TC41 542 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 FANK1Q8TC84 345 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 GGHQ92820 318 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 UBE2FQ969M7 185 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 OMA1Q96E52 524 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 SCMH1Q96GD3 660 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 IMMP1LQ96LU5 166 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 GPA33Q99795 319 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TSSK6Q9BXA6 273 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 NDEL1Q9GZM8 345 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 LAT2Q9GZY6 243 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 ZNF700Q9H0M5 742 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 ACOT13Q9NPJ3 140 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 TVP23BQ9NYZ1 205 aa12.5□□□□□ -0.41
HDAC6-215ENST00000465457 FLRT3Q9NZU0 649 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms