RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 BTNL2Q9UIR0 455 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 MOKQ9UQ07 419 aa17.28■□□□□ 0.36
VARS-221ENST00000463184 LOC100289279A0A1B0GTE1 492 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 PRAMEF27A3QJZ7 478 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 HMGN4O00479 90 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 FAAHO00519 579 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 AP3D1O14617 1153 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 UQCRBP14927 111 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 TACR3P29371 465 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 CHI3L1P36222 383 aaPredicted RBP17.27■□□□□ 0.36
VARS-221ENST00000463184 NR4A2P43354 598 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 GGTLC2Q14390 218 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 MSANTD1Q6ZTZ1 278 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 ABHD12BQ7Z5M8 362 aaPredicted RBP17.27■□□□□ 0.36
VARS-221ENST00000463184 C10orf82Q8WW14 230 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 CCDC115Q96NT0 180 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 TRNT1Q96Q11 434 aaKnown RBP17.27■□□□□ 0.36
VARS-221ENST00000463184 SLC35A5Q9BS91 424 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 C19orf24Q9BVV8 132 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 ZNF385DQ9H6B1 395 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 MYOZ1Q9NP98 299 aaPredicted RBP17.27■□□□□ 0.36
VARS-221ENST00000463184 MRGBPQ9NV56 204 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 ARFGEF3Q5TH69 2177 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 MALRD1Q5VYJ5 2156 aa17.27■□□□□ 0.36
VARS-221ENST00000463184 SVEP1Q4LDE5 3571 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 AGAP5A6NIR3 686 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 GPIP06744 558 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 DRD4P21917 467 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 SNRPD2P62316 118 aaKnown RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 TXNL4AP83876 142 aaKnown RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 FAM120AOSQ5T036 256 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 OTUD3Q5T2D3 398 aaPredicted RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 AAED1Q7RTV5 226 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 CPLX4Q7Z7G2 160 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 FUNDC1Q8IVP5 155 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 ZIC4Q8N9L1 334 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 MSI2Q96DH6 328 aaKnown RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 SORCS2Q96PQ0 1159 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 ELAC2Q9BQ52 826 aaKnown RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 PRR14Q9BWN1 585 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 RMND5AQ9H871 391 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 MTHFD2LQ9H903 347 aaPredicted RBP17.26■□□□□ 0.35
VARS-221ENST00000463184 CHODLQ9H9P2 273 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 PRDM4Q9UKN5 801 aa17.26■□□□□ 0.35
VARS-221ENST00000463184 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.26■□□□□ 0.358e-8■■■□□ 17.7
VARS-221ENST00000463184 LOC390937A0A1W2PQ73 354 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 ZC3H12DA2A288 527 aaKnown RBP17.25■□□□□ 0.35
VARS-221ENST00000463184 SLC35F4A4IF30 521 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 C8BP07358 591 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 APEHP13798 732 aaKnown RBP17.25■□□□□ 0.35
VARS-221ENST00000463184 CDH2P19022 906 aaPredicted RBP17.25■□□□□ 0.35
VARS-221ENST00000463184 HNF1AP20823 631 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 SERPINF1P36955 418 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 GNA13Q14344 377 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 SYPL1Q16563 259 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 AGKQ53H12 422 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 BLOC1S3Q6QNY0 202 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 LRRC74BQ6ZQY2 392 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 SPATA21Q7Z572 469 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 TMEM99Q8N816 258 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 OR9K2Q8NGE7 335 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 ZNF385AQ96PM9 386 aaKnown RBP17.25■□□□□ 0.35
VARS-221ENST00000463184 KCNS3Q9BQ31 491 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 ADAM19Q9H013 955 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 FAM107BQ9H098 131 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 CCDC167Q9P0B6 97 aa17.25■□□□□ 0.35
VARS-221ENST00000463184 CFAP73A6NFT4 308 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 LIPT2A6NK58 231 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 IL7RP16871 459 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 ANXA11P50995 505 aaKnown RBP17.24■□□□□ 0.35
VARS-221ENST00000463184 EPS8Q12929 822 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 CEACAM7Q14002 265 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 HIKESHIQ53FT3 197 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 RNF130Q86XS8 419 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 ANKFN1Q8N957 763 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 ZNF540Q8NDQ6 660 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 WDR60Q8WVS4 1066 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 VPS33AQ96AX1 596 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 AURKBQ96GD4 344 aaPredicted RBP17.24■□□□□ 0.35
VARS-221ENST00000463184 FOXN4Q96NZ1 517 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 SLC38A2Q96QD8 506 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 PANX1Q96RD7 426 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 KATNB1Q9BVA0 655 aa17.24■□□□□ 0.35
VARS-221ENST00000463184 IGHV1-18A0A0C4DH31 117 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 CCDC154A6NI56 674 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 AQP7P3A6NL99 342 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 B9A039 149 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 SNX3O60493 162 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 KRT33AO76009 404 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 PDE5AO76074 875 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 AKR7A3O95154 331 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 CRYAAP02489 173 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 CHRM4P08173 479 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 RPS4Y1P22090 263 aaKnown RBP17.23■□□□□ 0.35
VARS-221ENST00000463184 CXCR1P25024 350 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 OR7A5Q15622 319 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 TBRG1Q3YBR2 411 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 IQCCQ4KMZ1 466 aa17.23■□□□□ 0.35
VARS-221ENST00000463184 TMEM225Q6GV28 225 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms