RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 GSNP06396 782 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 GUSBP08236 651 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 UBTFL6P0CB48 400 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 TFPIP10646 304 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 CBR1P16152 277 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 CDH2P19022 906 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 TAC1P20366 129 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 NR4A1P22736 598 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 GCH1P30793 250 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SELENOPP49908 381 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SERPINB9P50453 376 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OR2B6P58173 313 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SLC35A1P78382 337 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 IL13RA1P78552 427 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 MYBPC1Q00872 1141 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 FUT5Q11128 374 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ZP4Q12836 540 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SNTB2Q13425 540 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 IMPG1Q17R60 797 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 RFTN2Q52LD8 501 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 FRMD7Q6ZUT3 714 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OLIG3Q7RTU3 272 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ABHD12BQ7Z5M8 362 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 SLC22A9Q8IVM8 553 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 BPIFB2Q8N4F0 458 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SPATA4Q8NEY3 305 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OR4M2Q8NGB6 313 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OR56A1Q8NGH5 318 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OR5D16Q8NGK9 328 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 CLHC1Q8NHS4 586 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 NANPQ8TBE9 248 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SFXN5Q8TD22 340 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ADAMTS15Q8TE58 950 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 OIT3Q8WWZ8 545 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 AURKBQ96GD4 344 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 ZNF48Q96MX3 618 aaPredicted RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 LINC00470Q9BZP3 86 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 ZNF665Q9H7R5 613 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 DYNLRB1Q9NP97 96 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SLC52A3Q9NQ40 469 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 EXOSC3Q9NQT5 275 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 DDX28Q9NUL7 540 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 C1orf109Q9NX04 203 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 SH3BP4Q9P0V3 963 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 MYEF2Q9P2K5 600 aaKnown RBP6.59□□□□□ -1.35
SMC3-202ENST00000462899 BAIAP2L1Q9UHR4 511 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 PCDHGB4Q9UN71 923 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 CORINQ9Y5Q5 1042 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 DOCK11Q5JSL3 2073 aa6.59□□□□□ -1.35
SMC3-202ENST00000462899 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.36
SMC3-202ENST00000462899 SH3PXD2BA1X283 911 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 OR6C65A6NJZ3 312 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 LIPT2A6NK58 231 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 ZNF587BE7ETH6 402 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 G3V2L1 256 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 CLDN34H7C241 214 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 M0R233 179 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 LSM1O15116 133 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 SCAMP2O15127 329 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 FZD7O75084 574 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 SEC22BO75396 215 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 UPK3AO75631 287 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 ZNF432O94892 652 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 MPZL1O95297 269 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 AK1P00568 194 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 IGHV2-5P01817 119 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 INHBAP08476 426 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 KRT16P08779 473 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 NUDT17P0C025 328 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 LAMP1P11279 417 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 GCAP28676 217 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 PHBP35232 272 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 PAFAH1B1P43034 410 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 CCT3P49368 545 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 SEC24CP53992 1094 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 SH3BGRP55822 239 aaPredicted RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 UBE2NP61088 152 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 TP53BP2Q13625 1128 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 DAG1Q14118 895 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 GPR68Q15743 365 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 FXNQ16595 210 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 ARHGAP11BQ3KRB8 267 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 TYW3Q6IPR3 259 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 ACSM5Q6NUN0 579 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 TIFABQ6ZNK6 161 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 RHOUQ7L0Q8 258 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 EIF3MQ7L2H7 374 aaKnown RBP6.58□□□□□ -1.36
SMC3-202ENST00000462899 AAED1Q7RTV5 226 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 LCA5Q86VQ0 697 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 EPHX4Q8IUS5 362 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 SIGLECL1Q8N7X8 197 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 TMEM99Q8N816 258 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 STK35Q8TDR2 534 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 C22orf15Q8WYQ4 148 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 TAF15Q92804 592 aaKnown RBP eCLIP6.58□□□□□ -1.36
SMC3-202ENST00000462899 TUBB1Q9H4B7 451 aa6.58□□□□□ -1.36
SMC3-202ENST00000462899 ZNF385DQ9H6B1 395 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms