RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 RABL3Q5HYI8 236 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PDSS1Q5T2R2 415 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 C6orf52Q5T4I8 152 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 C11orf71Q6IPW1 123 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PODNL1Q6PEZ8 512 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 BRICD5Q6PL45 260 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMPPEQ6ZT21 453 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 FCRLAQ7L513 359 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TREML1Q86YW5 311 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 POU5F2Q8N7G0 328 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HIPK4Q8NE63 616 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GPR32P1Q8NGA4 272 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HSD17B8Q92506 261 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 KISS1RQ969F8 398 aaPredicted RBP6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GTPBP3Q969Y2 492 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 LRRC58Q96CX6 371 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PSD2Q9BQI7 771 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HDHD5Q9BXW7 423 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GRIP2Q9C0E4 1043 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 BCO1Q9HAY6 547 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 GP6Q9HCN6 339 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 YAE1D1Q9NRH1 226 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 MRGBPQ9NV56 204 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PRSS50Q9UI38 385 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 USP22Q9UPT9 525 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMED7Q9Y3B3 224 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 HDGFL3Q9Y3E1 203 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 CAPN7Q9Y6W3 813 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
CDC42BPA-210ENST00000462553 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 C5orf58C9J3I9 102 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 DYNC1I1O14576 645 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC22A2O15244 555 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 PHF1O43189 567 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF208O43345 1280 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SNX3O60493 162 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 TPST2O60704 377 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CYTIPO60759 359 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 FZD7O75084 574 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 NPIPB7O75200 414 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 LYZL6O75951 148 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 PMS2P2O95744 297 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 TP53P04637 393 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SNRPBP14678 240 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CCNA2P20248 432 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CD247P20963 164 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 PTNP21246 168 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SLC6A2P23975 617 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 PCGF2P35227 344 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 HTR3AP46098 478 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CDH11P55287 796 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SPOCK1Q08629 439 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 RBBP4Q09028 425 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ITGADQ13349 1161 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 P2RY6Q15077 328 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 MAPRE2Q15555 327 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 NPTX1Q15818 432 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 NRF1Q16656 503 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CYP51A1Q16850 503 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZSWIM7Q19AV6 140 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 CHRFAM7AQ494W8 412 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 GTF2IRD2BQ6EKJ0 949 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 WBP2NLQ6ICG8 309 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 NANOGP8Q6NSW7 305 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 C8orf82Q6P1X6 216 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 C6orf89Q6UWU4 347 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 B3GLCTQ6Y288 498 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 Q6ZT83 130 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 BHLHA15Q7RTS1 189 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SPATA21Q7Z572 469 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 GTF2IRD2Q86UP8 949 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 TSPYL5Q86VY4 417 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 C11orf65Q8NCR3 313 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR10H5Q8NGA6 315 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR8J3Q8NGG0 315 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR4D11Q8NGI4 311 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 OR10A6Q8NH74 314 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 TAMM41Q96BW9 452 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 RCN3Q96D15 328 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ZNF300Q96RE9 604 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ELAC2Q9BQ52 826 aaKnown RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 MYLK2Q9H1R3 596 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 NANOGQ9H9S0 305 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SERINC1Q9NRX5 453 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 ANGPT4Q9Y264 503 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 B3GALT5Q9Y2C3 310 aa6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 SPIN1Q9Y657 262 aaPredicted RBP6.97□□□□□ -1.29
CDC42BPA-210ENST00000462553 IGKV1D-42A0A075B6H8 117 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 IGKV3D-15A0A087WSY6 115 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 LOC100653049A0A140TA62 436 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 A0A1B0GWA3 101 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 ZNF716A6NP11 495 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 A8MV72 311 aaPredicted RBP6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 M0R3H8 397 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 SULT2B1O00204 365 aa6.96□□□□□ -1.3
CDC42BPA-210ENST00000462553 ABCD4O14678 606 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms