RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 CLEC18AA5D8T8 446 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 EIF1BO60739 113 aaKnown RBP17.12■□□□□ 0.33
XPA-202ENST00000462523 ENTPD5O75356 428 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 ASAH2BP0C7U1 165 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 HOXB6P17509 224 aaKnown RBP17.12■□□□□ 0.33
XPA-202ENST00000462523 IST1P53990 364 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 PRKCDQ05655 676 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 CDSNQ15517 529 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 CLEC18BQ6UXF7 455 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
XPA-202ENST00000462523 CLEC18CQ8NCF0 446 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 OR4K5Q8NGD3 323 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 PYDC1Q8WXC3 89 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 RND1Q92730 232 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 BPIFA2Q96DR5 249 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 ALPK1Q96QP1 1244 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 KLHL4Q9C0H6 718 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 RNF6Q9Y252 685 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 U3KQV3 271 aa17.12■□□□□ 0.33
XPA-202ENST00000462523 ZG16O60844 167 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 TNFSF13O75888 250 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 KRT36O76013 467 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 MT-ATP6P00846 226 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 IL2RAP01589 272 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 IFI30P13284 250 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SMIM11AP58511 58 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 LAPTM4AQ15012 233 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 TMEM179BQ7Z7N9 219 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 LIX1LQ8IVB5 337 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SLC43A2Q8N370 569 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 KDM8Q8N371 416 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 C10orf53Q8N6V4 93 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 LIPHQ8WWY8 451 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 ZHX1-C8orf76Q96EF9 292 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SGTBQ96EQ0 304 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 FKRPQ9H9S5 495 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 NTN4Q9HB63 628 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 B3GAT1Q9P2W7 334 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 AP4S1Q9Y587 144 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 INTS1Q8N201 2190 aaKnown RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 H3BNX3 289 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 TNFRSF11BO00300 401 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 CDC42EP2O14613 210 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SS18L1O75177 396 aaPredicted RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 OR7A10O76100 309 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 LDLRP01130 860 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 TMIGD3P0DMS9 266 aaPredicted RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 KIR2DL2P43627 348 aaPredicted RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 OMPP47874 163 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 RASGEF1BQ0VAM2 473 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 FHL1Q13642 323 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SLC17A1Q14916 467 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 MFSD13AQ14CX5 517 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 TUSC5Q8IXB3 177 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SCAIQ8N9R8 606 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 GMPPAQ96IJ6 420 aaPredicted RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 ZFP3Q96NJ6 502 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 GPA33Q99795 319 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 CHST11Q9NPF2 352 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 NANSQ9NR45 359 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 MRPL39Q9NYK5 338 aaKnown RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 ZNF229Q9UJW7 825 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 SAMHD1Q9Y3Z3 626 aaKnown RBP17.11■□□□□ 0.33
XPA-202ENST00000462523 CORINQ9Y5Q5 1042 aa17.11■□□□□ 0.33
XPA-202ENST00000462523 IGKV3D-15A0A087WSY6 115 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 A0A1W2PNV4 684 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 WIPF3A6NGB9 483 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 MS4A18H0YCH9 400 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 HPRP00739 348 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 NTF4P34130 210 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 GPR4P46093 362 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 SLC16A1P53985 500 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 PER3P56645 1201 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 RNPS1Q15287 305 aaKnown RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 MS4A18Q3C1V0 323 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 OR2A2Q6IF42 318 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 ZNF770Q6IQ21 691 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 H1FNTQ75WM6 255 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 MAMDC2Q7Z304 686 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 ZER1Q7Z7L7 766 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 PIGXQ8TBF5 258 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 ITLN2Q8WWU7 325 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 ZNF775Q96BV0 537 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 FAM46AQ96IP4 442 aaKnown RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 NAA11Q9BSU3 229 aaPredicted RBP17.1■□□□□ 0.33
XPA-202ENST00000462523 YY1AP1Q9H869 796 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 REEP1Q9H902 201 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 BCO1Q9HAY6 547 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 B3GALT5Q9Y2C3 310 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 ADGRG4Q8IZF6 3080 aa17.1■□□□□ 0.33
XPA-202ENST00000462523 HSPB2A8KAH6 182 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 PLPP3O14495 311 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 CLOCKO15516 846 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 KLF4O43474 513 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 TSPAN19P0C672 248 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 CTSSP25774 331 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 GTF2E2P29084 291 aaKnown RBP17.09■□□□□ 0.33
XPA-202ENST00000462523 AGTR1P30556 359 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 HSPB2Q16082 182 aa17.09■□□□□ 0.33
XPA-202ENST00000462523 HMBOX1Q6NT76 420 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms