RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 ROPN1LQ96C74 230 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 C3orf30Q96M34 536 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 SLC6A7Q99884 636 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
PABPC4-208ENST00000461578 EXOSC3Q9NQT5 275 aaKnown RBP11.85□□□□□ -0.51
PABPC4-208ENST00000461578 ZNF503-AS2A6NEH8 195 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 PNPP00491 289 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 TFP02787 698 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 CBR1P16152 277 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 PRPS1L1P21108 318 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ALDH3B1P43353 468 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 CAPZA2P47755 286 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 CCT5P48643 541 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 HPCAP84074 193 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ROR2Q01974 943 aaKnown RBP11.84□□□□□ -0.51
PABPC4-208ENST00000461578 BNIP2Q12982 314 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 MSMPQ1L6U9 139 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 CREB3L2Q70SY1 520 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 RIMKLAQ8IXN7 391 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 OR4A15Q8NGL6 344 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 MAGEE2Q8TD90 523 aaPredicted RBP11.84□□□□□ -0.51
PABPC4-208ENST00000461578 MRPL37Q9BZE1 423 aaKnown RBP11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ZNF696Q9H7X3 374 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 NOX3Q9HBY0 568 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 ZNF275Q9NSD4 429 aaPredicted RBP11.84□□□□□ -0.51
PABPC4-208ENST00000461578 REV1Q9UBZ9 1251 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 CMAHPQ9Y471 501 aa11.84□□□□□ -0.51
PABPC4-208ENST00000461578 M0R233 179 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 PPIHO43447 177 aaKnown RBP11.83□□□□□ -0.52
PABPC4-208ENST00000461578 SYNGR3O43761 229 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 SEC14L2O76054 403 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 ADRA2CP18825 462 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 CXCR1P25024 350 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 SEC24CP53992 1094 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 PCLAFQ15004 111 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 MAD2L1BPQ15013 274 aaPredicted RBP11.83□□□□□ -0.52
PABPC4-208ENST00000461578 XKR7Q5GH72 579 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 ZNF311Q5JNZ3 666 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 C6orf136Q5SQH8 315 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 ZCCHC23Q6ZST2 131 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 MDP1Q86V88 176 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 FAM169BQ8N8A8 192 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 MIPOL1Q8TD10 442 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 YIPF5Q969M3 257 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 MRPL24Q96A35 216 aaKnown RBP11.83□□□□□ -0.52
PABPC4-208ENST00000461578 ZNF317Q96PQ6 595 aaPredicted RBP11.83□□□□□ -0.52
PABPC4-208ENST00000461578 SYT3Q9BQG1 590 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 ZNF747Q9BV97 191 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 TAPBPLQ9BX59 468 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 SUCNR1Q9BXA5 334 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 RACGAP1Q9H0H5 632 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 POLE3Q9NRF9 147 aa11.83□□□□□ -0.52
PABPC4-208ENST00000461578 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 PRAMEF27A3QJZ7 478 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 COPEO14579 308 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 TRIM13O60858 407 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 CPSF4O95639 269 aaKnown RBP11.82□□□□□ -0.52
PABPC4-208ENST00000461578 AGR2O95994 175 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 BCL10O95999 233 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 CHRM4P08173 479 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 G6PDP11413 515 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 ACHEP22303 614 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 CRHR1P34998 444 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 P2RY4P51582 365 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 LMO4P61968 165 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 SLC9B1Q4ZJI4 515 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 MIDNQ504T8 468 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 PRAMEF8Q5VWM4 474 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 PRAMEF7Q5VXH5 474 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 SHISA2Q6UWI4 295 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 TRMT10CQ7L0Y3 403 aaKnown RBP11.82□□□□□ -0.52
PABPC4-208ENST00000461578 ANKRD46Q86W74 232 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 EPHX4Q8IUS5 362 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 KDM8Q8N371 416 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 BPIFB2Q8N4F0 458 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 ZDHHC22Q8N966 263 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 OIT3Q8WWZ8 545 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 C22orf15Q8WYQ4 148 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 RDH5Q92781 318 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 PIF1Q9H611 641 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 MOV10Q9HCE1 1003 aaKnown RBP11.82□□□□□ -0.52
PABPC4-208ENST00000461578 FZR1Q9UM11 496 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 PPIAL4AQ9Y536 164 aa11.82□□□□□ -0.52
PABPC4-208ENST00000461578 CFAP73A6NFT4 308 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 SMIM23A6NLE4 172 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 TMEM229AB2RXF0 380 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 FRS3O43559 492 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 NCR1O76036 304 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 C1QCP02747 245 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 GUSBP08236 651 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 FGF4P08620 206 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
PABPC4-208ENST00000461578 NR4A1P22736 598 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 ARR3P36575 388 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
PABPC4-208ENST00000461578 CLDN17P56750 224 aa11.81□□□□□ -0.52
PABPC4-208ENST00000461578 UBA52P62987 128 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms