RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 MSRB3Q8IXL7 192 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 ZNF385AQ96PM9 386 aaKnown RBP12.25□□□□□ -0.45
USP4-206ENST00000461553 ALKBH3Q96Q83 286 aaPredicted RBP12.25□□□□□ -0.45
USP4-206ENST00000461553 RABEP2Q9H5N1 569 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 BARX1Q9HBU1 254 aaPredicted RBP12.25□□□□□ -0.45
USP4-206ENST00000461553 SLC17A5Q9NRA2 495 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 RASD1Q9Y272 281 aa12.25□□□□□ -0.45
USP4-206ENST00000461553 ZNF587BE7ETH6 402 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 NPIPB7O75200 414 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 WNT11O96014 354 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 RPS5P46782 204 aaKnown RBP12.24□□□□□ -0.45
USP4-206ENST00000461553 PPP2R2BQ00005 443 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 SCARB2Q14108 478 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 NRF1Q16656 503 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 PAGE3Q5JUK9 113 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 DHRS4L2Q6PKH6 230 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 C5orf46Q6UWT4 87 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 HDXQ7Z353 690 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 FBXL14Q8N1E6 418 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 MFSD8Q8NHS3 518 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 STON2Q8WXE9 905 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 SLC38A4Q969I6 547 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 SLC25A36Q96CQ1 311 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 DHRS9Q9BPW9 319 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 GRIP2Q9C0E4 1043 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 C12orf10Q9HB07 376 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 SLAMF8Q9P0V8 285 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 TESQ9UGI8 421 aaKnown RBP12.24□□□□□ -0.45
USP4-206ENST00000461553 SLC13A4Q9UKG4 626 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 ANGPT4Q9Y264 503 aa12.24□□□□□ -0.45
USP4-206ENST00000461553 TRBV5-3A0A0A0MS03 114 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 PRORSD1PA6NEY8 169 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 OR6C65A6NJZ3 312 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 IGHV4-39P01824 125 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 PNMTP11086 282 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 CDH2P19022 906 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 SLC6A2P23975 617 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 PCSK6P29122 969 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 P2RY4P51582 365 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 RGS8P57771 180 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 PRPS1P60891 318 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 SLC25A3Q00325 362 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 TNK1Q13470 666 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 ALG10BQ5I7T1 473 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 NIPAL3Q6P499 406 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 CREB3L2Q70SY1 520 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 DHDDSQ86SQ9 333 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 ZIC4Q8N9L1 334 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 BHLHE22Q8NFJ8 381 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 DNAJA4Q8WW22 397 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 MAGEB18Q96M61 343 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 ADAD1Q96M93 576 aaKnown RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 ZNF607Q96SK3 696 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 CPPED1Q9BRF8 314 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 PTDSS2Q9BVG9 487 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 C1QTNF6Q9BXI9 259 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 CACNG6Q9BXT2 260 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 IKZF5Q9H5V7 419 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 TMEM38AQ9H6F2 299 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 FKRPQ9H9S5 495 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 OBP2BQ9NPH6 170 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 CBLN4Q9NTU7 201 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 SELENONQ9NZV5 590 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 LEF1Q9UJU2 399 aaPredicted RBP12.23□□□□□ -0.45
USP4-206ENST00000461553 TRIM33Q9UPN9 1127 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 GMEB1Q9Y692 573 aa12.23□□□□□ -0.45
USP4-206ENST00000461553 A0A1B0GWA3 101 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 FTCDNL1E5RQL4 147 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 E7EQL1 145 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 AIM2O14862 343 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 ANGPT2O15123 496 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 AKAP8O43823 692 aaKnown RBP12.22□□□□□ -0.45
USP4-206ENST00000461553 OR2T1O43869 369 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 SERPINB7O75635 380 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 CD8AP01732 235 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 ZNF43P17038 809 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 HTR2AP28223 471 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 AQP1P29972 269 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 TTKP33981 857 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 ACVR1BP36896 505 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 SELENOPP49908 381 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 FABP6P51161 128 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 IL1RL1Q01638 556 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 EGR4Q05215 589 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 CYP51A1Q16850 503 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 FAM69AQ5T7M9 428 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 ZNF544Q6NX49 715 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 B3GLCTQ6Y288 498 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 C10orf111Q8N326 155 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 MUC15Q8N387 334 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 LSMEM1Q8N8F7 131 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 WDR31Q8NA23 367 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 HIPK4Q8NE63 616 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 RNF217Q8TC41 542 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 CKAP2Q8WWK9 683 aa12.22□□□□□ -0.45
USP4-206ENST00000461553 KTI12Q96EK9 354 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms