RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 RNF11Q9Y3C5 154 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 TMEM184BQ9Y519 407 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PTGDR2Q9Y5Y4 395 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 MRPS18BQ9Y676 258 aaKnown RBP4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AP4B1Q9Y6B7 739 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 AP1M2Q9Y6Q5 423 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 LRBAP50851 2863 aa4.4□□□□□ -1.71
ATPAF1-203ENST00000460928 PRRC2CQ9Y520 2896 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR2A25A4D2G3 310 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CXorf65A6NEN9 183 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 USP17L23D6RBM5 183 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 LOC110117498-PIK3R3F6TDL0 507 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 H3BMH7 237 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SAP18O00422 153 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 UBFD1O14562 309 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 COPEO14579 308 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR7A17O14581 309 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ANGPT2O15123 496 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR1F1O43749 312 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TYROBPO43914 113 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PLIN3O60664 434 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 LYPLA1O75608 230 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 STK16O75716 305 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CCNKO75909 580 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PDE9AO76083 593 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SOX30O94993 753 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TBX6O95947 436 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PLGP00747 810 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 RPN2P04844 631 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 S100A8P05109 93 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ANXA5P08758 320 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 HIST1H2AGP0C0S8 130 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 GP1BBP13224 206 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP6V1B1P15313 513 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 HIST1H2ADP20671 130 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 S100PP25815 95 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CMPK1P30085 196 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR1D4P47884 311 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CCT3P49368 545 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ARHGDIAP52565 204 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 EFNA3P52797 238 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SUCLG1P53597 346 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ATP12AP54707 1039 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 FOXA1P55317 472 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 MAT1AQ00266 395 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC18A2Q05940 514 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PRDX1Q06830 199 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CD300CQ08708 224 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ILF2Q12905 390 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CHIT1Q13231 466 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 DDX39BQ13838 428 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 DOC2AQ14183 400 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 KIR2DS3Q14952 304 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PCLAFQ15004 111 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 RNPS1Q15287 305 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TRIP10Q15642 601 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SGCAQ16586 387 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SYT16Q17RD7 645 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC5A12Q1EHB4 618 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 FAM83EQ2M2I3 478 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 EIF2S3LQ2VIR3 472 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 XKR6Q5GH73 641 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TIGD3Q6B0B8 471 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 KRT80Q6KB66 452 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 CAPN13Q6MZZ7 669 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C11orf87Q6NUJ2 197 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ERICH5Q6P6B1 374 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 LCTLQ6UWM7 567 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C5orf46Q6UWT4 87 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 GOLGA7Q7Z5G4 137 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C17orf64Q86WR6 236 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C10orf107Q8IVU9 208 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PRSS58Q8IYP2 241 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PARP8Q8N3A8 854 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR7G3Q8NG95 312 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 OR5T3Q8NGG3 340 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 GOT1L1Q8NHS2 421 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 HMGCLL1Q8TB92 370 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 STAG3L4Q8TBR4 150 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 FAR1Q8WVX9 515 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC5A11Q8WWX8 675 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 FIG4Q92562 907 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TANKQ92844 425 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 UCN3Q969E3 161 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC22A18Q96BI1 424 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 MMABQ96EY8 250 aaPredicted RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SLC45A3Q96JT2 553 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 PPP3R2Q96LZ3 170 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 SORT1Q99523 831 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 C12orf57Q99622 126 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 MRPL57Q9BQC6 102 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 ZNF251Q9BRH9 671 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 TM2D2Q9BX73 214 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 STRADBQ9C0K7 418 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 RAB33BQ9H082 229 aa4.39□□□□□ -1.71
ATPAF1-203ENST00000460928 NOL11Q9H8H0 719 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms