RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IDH3BO43837 385 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PFKFB2O60825 505 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 SHOX2O60902 331 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 CTDNEP1O95476 244 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 HPP00738 406 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PVRP15151 417 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PRKACAP17612 351 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CD1CP29017 333 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 OTX1P32242 354 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 ACVR1BP36896 505 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 GYG1P46976 350 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CSRP3P50461 194 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 HLCSP50747 726 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 HILS1P60008 231 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 VSNL1P62760 191 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 KLRC3Q07444 240 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ILKQ13418 452 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 IL18R1Q13478 541 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CUL1Q13616 776 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CRMP1Q14194 572 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CASP8Q14790 479 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PPP1R3AQ16821 1122 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CNPY1Q3B7I2 92 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 C14orf28Q4W4Y0 310 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 FAM120AOSQ5T036 256 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PLCXD3Q63HM9 321 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PVRIGQ6DKI7 326 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 FAHD2BQ6P2I3 314 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 RFWD3Q6PCD5 774 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 REG3GQ6UW15 175 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ENPP6Q6UWR7 440 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 C19orf35Q6ZS72 473 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ZNF589Q86UQ0 364 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 CATSPER3Q86XQ3 398 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 RNF130Q86XS8 419 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 OR4K14Q8NGD5 310 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 OR13F1Q8NGS4 319 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 OR9A1PQ8NGU1 263 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 FAM110BQ8TC76 370 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 GPX8Q8TED1 209 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CCDC12Q8WUD4 166 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 NRGNQ92686 78 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 TAF15Q92804 592 aaKnown RBP eCLIP2.4□□□□□ -2.03
HPS3-203ENST00000460822 FBXO17Q96EF6 278 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 FAHD2AQ96GK7 314 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 PPP1R16AQ96I34 528 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ART5Q96L15 291 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ZNF396Q96N95 335 aaPredicted RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 LLPHQ9BRT6 129 aaKnown RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 SPATA16Q9BXB7 569 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 TEKT3Q9BXF9 490 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 RGCCQ9H4X1 137 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 MED4Q9NPJ6 270 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 LZTFL1Q9NQ48 299 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 CHRAC1Q9NRG0 131 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 ELOVL2Q9NXB9 296 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 SPATA2Q9UM82 520 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 SCML2Q9UQR0 700 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 STARD10Q9Y365 291 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 MRPL11Q9Y3B7 192 aaKnown RBP2.4□□□□□ -2.03
HPS3-203ENST00000460822 PEX16Q9Y5Y5 336 aa2.4□□□□□ -2.03
HPS3-203ENST00000460822 DIP2AQ14689 1571 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 NWD1Q149M9 1564 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 PIK3C2AO00443 1686 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 USP54Q70EL1 1684 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SIPA1L3O60292 1781 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 RGPD2P0DJD1 1756 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 MROH7-TTC4A0A0A0MT08 1334 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ZNF609O15014 1411 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SLIT1O75093 1534 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 SPEF2Q9C093 1822 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 IGLV4-3A0A075B6K6 122 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 IGHV3OR16-12A0A075B7B8 117 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 A0A1W2PPV9 198 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 LRRIQ3A6PVS8 624 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 FOXI3A8MTJ6 420 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 TEX46H3BTG2 121 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 FCN1O00602 326 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 DLGAP1O14490 977 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 TRDMT1O14717 391 aaKnown RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 STX10O60499 249 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ERLIN2O94905 339 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 OR2F2O95006 317 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 YEATS4O95619 227 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 POP4O95707 220 aaKnown RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 SEMA4FO95754 770 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ERCC1P07992 297 aaPredicted RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 GCFC2P16383 781 aaKnown RBP2.39□□□□□ -2.03
HPS3-203ENST00000460822 SRMP19623 302 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 GCAP28676 217 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 ACLYP53396 1101 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 HSPA2P54652 639 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 LIM2P55344 173 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 CDK16Q00536 496 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 MYL5Q02045 173 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 LAGE3Q14657 143 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 SLC15A2Q16348 729 aa2.39□□□□□ -2.03
HPS3-203ENST00000460822 KLHL38Q2WGJ6 581 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms