RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 PKD1L1Q8TDX9 2849 aa11.43□□□□□ -0.58
SRRT-206ENST00000460194 TLDC2A0PJX2 215 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 WIPF1O43516 503 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 FRS3O43559 492 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 TCF21O43680 179 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 DAOP14920 347 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 THBS4P35443 961 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 POU3F1Q03052 451 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 EGR4Q05215 589 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 TRIP10Q15642 601 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 PDCD2Q16342 344 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 MSMPQ1L6U9 139 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 KLHL24Q6TFL4 600 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 ABHD12BQ7Z5M8 362 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 LRRC34Q8IZ02 419 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 ANKK1Q8NFD2 765 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 SEMA6DQ8NFY4 1073 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 OR4F15Q8NGB8 312 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 KIF18AQ8NI77 898 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 WDR60Q8WVS4 1066 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 PPP1R36Q96LQ0 422 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 ZNF75AQ96N20 296 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 ALKBH3Q96Q83 286 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 PTDSS2Q9BVG9 487 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 RSPO3Q9BXY4 272 aaPredicted RBP11.42□□□□□ -0.58
SRRT-206ENST00000460194 B3GAT1Q9P2W7 334 aa11.42□□□□□ -0.58
SRRT-206ENST00000460194 A0A096LPE4 126 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 A0A1W2PPZ6 126 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 A8MVM7 634 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 ZNF587BE7ETH6 402 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 VAMP5O95183 116 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 DBIP07108 87 aaKnown RBP11.41□□□□□ -0.58
SRRT-206ENST00000460194 GKN3PP0CG01 181 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 PRG2P13727 222 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 CBR1P16152 277 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 IL7RP16871 459 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 CFPP27918 469 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 CHN2P52757 468 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 CARTPTQ16568 116 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 DPY19L1Q2PZI1 675 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 FAM174BQ3ZCQ3 159 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 OGFOD2Q6N063 350 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 ZNF836Q6ZNA1 936 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 GPAT4Q86UL3 456 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
SRRT-206ENST00000460194 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.41□□□□□ -0.58
SRRT-206ENST00000460194 RACGAP1Q9H0H5 632 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 RAB1BQ9H0U4 201 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 SLC6A13Q9NSD5 602 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
SRRT-206ENST00000460194 IGHV2OR16-5A0A0B4J2B6 119 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 CCDC154A6NI56 674 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 OR6C65A6NJZ3 312 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 E9PBE3 544 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 hCG_2039718K7EN88 272 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 VENTXO95231 258 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 ALDOCP09972 364 aaKnown RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 TFPTP0C1Z6 253 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 NPR2P20594 1047 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 CXCR1P25024 350 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 CHI3L1P36222 383 aaPredicted RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 DVL1P1P54792 670 aaPredicted RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 TXNL4AP83876 142 aaKnown RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 HPCAP84074 193 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 RUNX1T1Q06455 604 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 C1orf140Q5VVS0 124 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 TMEM225Q6GV28 225 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 NIPAL3Q6P499 406 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 VHLLQ6RSH7 139 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 VRK2Q86Y07 508 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 ZNF440Q8IYI8 595 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 CDK20Q8IZL9 346 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 CLIP4Q8N3C7 705 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 SVOPLQ8N434 492 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 PLA2G12AQ9BZM1 189 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 ADPRHL2Q9NX46 363 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 B3GNT2Q9NY97 397 aa11.4□□□□□ -0.58
SRRT-206ENST00000460194 FBXO9Q9UK97 447 aaPredicted RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.4□□□□□ -0.58
SRRT-206ENST00000460194 LYNX1G3V0Z9 82 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 SERPINE1P05121 402 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 LYNX1P0DP58 116 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 PNMTP11086 282 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 APEX1P27695 318 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 COMPP49747 757 aaPredicted RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 CLNS1AP54105 237 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 SH3BGRP55822 239 aaPredicted RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 UBE2NP61088 152 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 ABCE1P61221 599 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 UFM1P61960 85 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 ARF1P84077 181 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 ROR2Q01974 943 aaKnown RBP11.39□□□□□ -0.59
SRRT-206ENST00000460194 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 WBP2NLQ6ICG8 309 aa11.39□□□□□ -0.59
SRRT-206ENST00000460194 NHLRC1Q6VVB1 395 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms