RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 C1QTNF6Q9BXI9 259 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 TCF7L2Q9NQB0 619 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 RASD1Q9Y272 281 aa19.94■□□□□ 0.78
PTPN4-207ENST00000460162 OR6C65A6NJZ3 312 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 TLX2O43763 284 aaPredicted RBP19.93■□□□□ 0.78
PTPN4-207ENST00000460162 CD5LO43866 347 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 TGDSO95455 350 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 DSCR9P59020 149 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 C6orf89Q6UWU4 347 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 MFSD8Q8NHS3 518 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 MAL2Q969L2 176 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 ALKBH3Q96Q83 286 aaPredicted RBP19.93■□□□□ 0.78
PTPN4-207ENST00000460162 RHNO1Q9BSD3 238 aa19.93■□□□□ 0.78
PTPN4-207ENST00000460162 KIAA1324LA8MWY0 1029 aaPredicted RBP19.92■□□□□ 0.78
PTPN4-207ENST00000460162 C5orf58C9J3I9 102 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 FTCDNL1E5RQL4 147 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 ZNF587BE7ETH6 402 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 FZD7O75084 574 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 KRT33AO76009 404 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 ETS2P15036 469 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 PAX7P23759 505 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 LRIF1Q5T3J3 769 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 AGBL2Q5U5Z8 902 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 CLEC2AQ6UVW9 174 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 CREB3L2Q70SY1 520 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 ZNF317Q96PQ6 595 aaPredicted RBP19.92■□□□□ 0.78
PTPN4-207ENST00000460162 C12orf10Q9HB07 376 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 TMEM45AQ9NWC5 275 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 ADAM21Q9UKJ8 722 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 ATP23Q9Y6H3 246 aa19.92■□□□□ 0.78
PTPN4-207ENST00000460162 BMP4P12644 408 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 GTF2E2P29084 291 aaKnown RBP19.91■□□□□ 0.78
PTPN4-207ENST00000460162 PRKAR1BP31321 381 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 SELENOPP49908 381 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 RAB35Q15286 201 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 HIKESHIQ53FT3 197 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 C5orf46Q6UWT4 87 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 OR1K1Q8NGR3 316 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 PTDSS2Q9BVG9 487 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 SLC25A37Q9NYZ2 338 aa19.91■□□□□ 0.78
PTPN4-207ENST00000460162 IGHV4-30-2A0A087WSY4 118 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 ELOA3DA6NLF2 546 aaPredicted RBP19.9■□□□□ 0.78
PTPN4-207ENST00000460162 ATP6V1G2-DDX39BF2Z307 99 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 ARAFP10398 606 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 PNMTP11086 282 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 CDH2P19022 906 aaPredicted RBP19.9■□□□□ 0.78
PTPN4-207ENST00000460162 PPIBP23284 216 aaKnown RBP19.9■□□□□ 0.78
PTPN4-207ENST00000460162 EGR4Q05215 589 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 CHRNB3Q05901 458 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 ELOA3BQ3SY89 546 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 TBRG1Q3YBR2 411 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 GCNT6Q5T4J0 391 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 NIPAL3Q6P499 406 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 BLOC1S3Q6QNY0 202 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 EPHX4Q8IUS5 362 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 ELOA3Q8NG57 546 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 OR10H5Q8NGA6 315 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 LRRC8CQ8TDW0 803 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 CCDC28BQ9BUN5 200 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 LINC00470Q9BZP3 86 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 RPS6KB2Q9UBS0 482 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 RCE1Q9Y256 329 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 GMEB1Q9Y692 573 aa19.9■□□□□ 0.78
PTPN4-207ENST00000460162 A0A096LNT2 108 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 NR5A2O00482 541 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 APOBEC3AP31941 199 aaPredicted RBP19.89■□□□□ 0.77
PTPN4-207ENST00000460162 RPS5P46782 204 aaKnown RBP19.89■□□□□ 0.77
PTPN4-207ENST00000460162 SH3BGRP55822 239 aaPredicted RBP19.89■□□□□ 0.77
PTPN4-207ENST00000460162 HOXC5Q00444 222 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 ANK3Q12955 4377 aaKnown RBP19.89■□□□□ 0.77
PTPN4-207ENST00000460162 FUNDC1Q8IVP5 155 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 MSRB3Q8IXL7 192 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 LSMEM1Q8N8F7 131 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 SPDL1Q96EA4 605 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 SPATA5L1Q9BVQ7 753 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 MOV10Q9HCE1 1003 aaKnown RBP19.89■□□□□ 0.77
PTPN4-207ENST00000460162 ATRQ13535 2644 aa19.89■□□□□ 0.77
PTPN4-207ENST00000460162 ARPC4-TTLL3A0A0A6YYG9 625 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 OR2T1O43869 369 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 LGI1O95970 557 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 CSF3P09919 207 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 SLC25A16P16260 332 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 IDH3AP50213 366 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 UBE2NP61088 152 aaKnown RBP19.88■□□□□ 0.77
PTPN4-207ENST00000460162 REEP3Q6NUK4 255 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 DHRS4L2Q6PKH6 230 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 KRT73Q86Y46 540 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 NFKBIDQ8NI38 313 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 MAGEE2Q8TD90 523 aaPredicted RBP19.88■□□□□ 0.77
PTPN4-207ENST00000460162 SLC38A4Q969I6 547 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 SLC25A36Q96CQ1 311 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 KTI12Q96EK9 354 aaPredicted RBP19.88■□□□□ 0.77
PTPN4-207ENST00000460162 SLC38A2Q96QD8 506 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 EBF4Q9BQW3 602 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 KATNB1Q9BVA0 655 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 SLCO1B3Q9NPD5 702 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 CCDC167Q9P0B6 97 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 CORO2BQ9UQ03 480 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 MOKQ9UQ07 419 aa19.88■□□□□ 0.77
PTPN4-207ENST00000460162 IGHV1-18A0A0C4DH31 117 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms