RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CACNG6Q9BXT2 260 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 ENKD1Q9H0I2 346 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 OR51J1Q9H342 316 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 CERS4Q9HA82 394 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 GPN1Q9HCN4 374 aaPredicted RBP8.1□□□□□ -1.11
HDAC3-202ENST00000459727 TCF7L1Q9HCS4 588 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 NANSQ9NR45 359 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 NUDT15Q9NV35 164 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 FBXO34Q9NWN3 711 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 B3GNT2Q9NY97 397 aa8.1□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0A6YYC8 382 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 A0A0A6YYJ9 748 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 A0A1W2PPC4 97 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 A0A1W2PQD3 144 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 TUBAL3A6NHL2 446 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 TTLL8A6PVC2 850 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 MCIDASD6RGH6 385 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 I3L1I5 382 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ACOT7O00154 380 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 LINC01565O15544 149 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF264O43296 627 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CDC40O60508 579 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 EIF4E2O60573 245 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CPNE3O75131 537 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 KRT33AO76009 404 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 IGKV1D-16P01601 117 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 TFP02787 698 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 IGHV4-34P06331 123 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 PROS1P07225 676 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CT45A8P0DMV1 189 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CT45A9P0DMV2 189 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 RCVRNP35243 200 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 OR10A3P58181 314 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 SSBP1Q04837 148 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 KLF9Q13886 244 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 FZD2Q14332 565 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 INSL4Q14641 139 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF74Q16587 644 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 Q499Y3 187 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 TP53I3Q53FA7 332 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ALG10Q5BKT4 473 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CT45A2Q5DJT8 189 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 SNAP47Q5SQN1 464 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 C9orf50Q5SZB4 431 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 BCL2L15Q5TBC7 163 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 OLFML2AQ68BL7 652 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 FAM109BQ6ICB4 259 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 NPSR1Q6W5P4 371 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ASB18Q6ZVZ8 466 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZAR1Q86SH2 424 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ATG4DQ86TL0 474 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 OR6V1Q8N148 313 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 UBE2J2Q8N2K1 259 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF615Q8N8J6 731 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 C16orf52Q8NHV5 167 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 FCAMRQ8WWV6 532 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 MARVELD3Q96A59 401 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 TOE1Q96GM8 510 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ZDHHC12Q96GR4 267 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 PEX11GQ96HA9 241 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 GFM1Q96RP9 751 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ABHD1Q96SE0 405 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 DDOQ99489 341 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 SLC38A3Q99624 504 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 RPP25Q9BUL9 199 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ALG12Q9BV10 488 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 LAT2Q9GZY6 243 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CLEC4MQ9H2X3 399 aaPredicted RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 PDE7BQ9NP56 450 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 SLC17A5Q9NRA2 495 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CLEC1BQ9P126 229 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 HCN3Q9P1Z3 774 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 GRHPRQ9UBQ7 328 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 SCP2D1Q9UJQ7 156 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 ERVK-19Q9WJR5 959 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CA5BQ9Y2D0 317 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 HSPB11Q9Y547 144 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 PCDHGA9Q9Y5G4 932 aaKnown RBP8.09□□□□□ -1.11
HDAC3-202ENST00000459727 V9GY05 133 aa8.09□□□□□ -1.11
HDAC3-202ENST00000459727 CACNA1IQ9P0X4 2223 aa8.09□□□□□ -1.12
HDAC3-202ENST00000459727 ATG2AQ2TAZ0 1938 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 A0A1B0GUH1 482 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 TRABD2BA6NFA1 517 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 OR6C76A6NM76 312 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 B4DGG1 531 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 FOXS1O43638 330 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 NARSO43776 548 aaKnown RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 PAHP00439 452 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 CLUP10909 449 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 ATF1P18846 271 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 EN2P19622 333 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 UQCRC1P31930 480 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 BTCP35070 178 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 NAA10P41227 235 aaPredicted RBP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 ART1P52961 327 aa8.08□□□□□ -1.12
HDAC3-202ENST00000459727 RPS11P62280 158 aaKnown RBP eCLIP8.08□□□□□ -1.12
HDAC3-202ENST00000459727 SKP2Q13309 424 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms