RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 C3orf30Q96M34 536 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 ALKBH3Q96Q83 286 aaPredicted RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 RBM4Q9BWF3 364 aaKnown RBP12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 MS4A5Q9H3V2 200 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 MEGF8Q7Z7M0 2845 aa12.37□□□□□ -0.43
LYSMD3-202ENST00000453259 ZC3H12DA2A288 527 aaKnown RBP12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 TRIM77I1YAP6 450 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 AP3D1O14617 1153 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 SCN2BO60939 215 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 VENTXO95231 258 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 IL7RP16871 459 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 ALDH3A1P30838 453 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 CALCRP30988 508 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 THBS4P35443 961 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 CHI3L1P36222 383 aaPredicted RBP12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 HGFACQ04756 655 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 LRRC74AQ0VAA2 488 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 OR7A5Q15622 319 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 ADRM1Q16186 407 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 LRRC74BQ6ZQY2 392 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 RINLQ6ZS11 566 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 SPATA21Q7Z572 469 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 KIRREL3Q8IZU9 778 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 C4orf33Q8N1A6 199 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 SVOPLQ8N434 492 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 RAB8BQ92930 207 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM186Q96B77 213 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 ZG16BQ96DA0 208 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 DNAJA3Q96EY1 480 aa12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 METTL17Q9H7H0 456 aaPredicted RBP12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 MARCOQ9UEW3 520 aaPredicted RBP12.36□□□□□ -0.43
LYSMD3-202ENST00000453259 MGAM2Q2M2H8 2515 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 IGHV2OR16-5A0A0B4J2B6 119 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 CLDN24A6NM45 220 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 HMGN4O00479 90 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 SYNGR3O43761 229 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 SKAP2O75563 359 aaPredicted RBP12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 MSMBP08118 114 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 FAM153BP0C7A2 387 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 ACHEP22303 614 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 SELENOPP49908 381 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 P2RY4P51582 365 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 HILS1P60008 231 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 COPZ1P61923 177 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 LGALS3BPQ08380 585 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 PRAMEF8Q5VWM4 474 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 PRAMEF7Q5VXH5 474 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 WBP2NLQ6ICG8 309 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 OLIG3Q7RTU3 272 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 CLEC4FQ8N1N0 589 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 RIBC1Q8N443 379 aaPredicted RBP12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 AGR3Q8TD06 166 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 GCDHQ92947 438 aaPredicted RBP12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 DPY30Q9C005 99 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 SLC38A1Q9H2H9 487 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 NELFAQ9H3P2 528 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 DENND2DQ9H6A0 471 aaPredicted RBP12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 USP22Q9UPT9 525 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 CMAHPQ9Y471 501 aa12.35□□□□□ -0.43
LYSMD3-202ENST00000453259 TRAV20A0A0B4J274 112 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM129A0AVI4 362 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 M0R233 179 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 FRS3O43559 492 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 AKAP8O43823 692 aaKnown RBP12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 TFPTP0C1Z6 253 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 ANPEPP15144 967 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 EGR1P18146 543 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 ARFIP2P53365 341 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 TMEM33P57088 247 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 IL1RL1Q01638 556 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 ROR2Q01974 943 aaKnown RBP12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 DAG1Q14118 895 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 CASP8Q14790 479 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 MMEL1Q495T6 779 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 MRPL2Q5T653 305 aaKnown RBP12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 PEX5LQ8IYB4 626 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 OR51F2Q8NH61 342 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 MFSD8Q8NHS3 518 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 STK35Q8TDR2 534 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 CCDC115Q96NT0 180 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 SLC35A5Q9BS91 424 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 RACGAP1Q9H0H5 632 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 ADPRHL2Q9NX46 363 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 CALML5Q9NZT1 146 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 BTNL2Q9UIR0 455 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 FBXL3Q9UKT7 428 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 PCDHB10Q9UN67 800 aa12.34□□□□□ -0.43
LYSMD3-202ENST00000453259 DYSFO75923 2080 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 FZD7O75084 574 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 NPIPB7O75200 414 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 SLC43A1O75387 559 aa12.33□□□□□ -0.44
LYSMD3-202ENST00000453259 SHBGP04278 402 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms