RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NR4A1P22736 598 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 AVPR1BP47901 424 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 C2orf54Q08AI8 447 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 TPBGQ13641 420 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 UBE2V2Q15819 145 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZBTB6Q15916 424 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 C3AR1Q16581 482 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 RPEL1Q2QD12 228 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 BEAN1Q3B7T3 259 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 GTDC1Q4AE62 458 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 YIF1BQ5BJH7 314 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR2G6Q5TZ20 316 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 FAHD1Q6P587 224 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 SPESP1Q6UW49 350 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 METTL7BQ6UX53 244 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 BTNL3Q6UXE8 466 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 CCDC121Q6ZUS5 278 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 AHSA2Q719I0 299 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 PGAP1Q75T13 922 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 ASCL5Q7RTU5 278 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 APTXQ7Z2E3 356 aaKnown RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 NUFIP2Q7Z417 695 aaKnown RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 MRGPREQ86SM8 312 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 HIPK1Q86Z02 1210 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 CMTM1Q8IZ96 169 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 EID3Q8N140 333 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 TMEM251Q8N6I4 163 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 OR2L2Q8NH16 312 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 ACER1Q8TDN7 264 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 IFT81Q8WYA0 676 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 AP3S1Q92572 193 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 HAS1Q92839 578 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 HGDQ93099 445 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 S100PBPQ96BU1 408 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 CENPNQ96H22 339 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 WFIKKN1Q96NZ8 548 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 NEDD4LQ96PU5 975 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 LGMNQ99538 433 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 SPRY4Q9C004 299 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 C6orf62Q9GZU0 229 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 LAT2Q9GZY6 243 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 DEFB129Q9H1M3 183 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 NHEJ1Q9H9Q4 299 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 RETNQ9HD89 108 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 C12orf4Q9NQ89 552 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 OLFML3Q9NRN5 406 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 RMND1Q9NWS8 449 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 RHBDL2Q9NX52 303 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 PACSIN3Q9UKS6 424 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 SLC17A4Q9Y2C5 497 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 WIPI2Q9Y4P8 454 aa3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 USP42Q9H9J4 1324 aaKnown RBP3.88□□□□□ -1.79
HMGB3P21-201ENST00000452483 A0A087X1B8 175 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 TEX13DA0A0J9YY54 714 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PSMB11A5LHX3 300 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 LRIT2A6NDA9 550 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 C2CD4DB7Z1M9 353 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 E5RJQ4 531 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 hCG_2039718K7EN88 272 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PLPP1O14494 284 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 TNFSF11O14788 317 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 TIMM23O14925 209 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PPP1R2P9O14990 202 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 P2RX6O15547 441 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 CD160O95971 181 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 SP1P08047 785 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 GATA1P15976 413 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZFP36P26651 326 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 TNFSF9P41273 254 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 FOLR3P41439 243 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 DAP3P51398 398 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 CRISP1P54107 249 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 MRPS22P82650 360 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 C2orf80Q0P641 193 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 ST3GAL3Q11203 375 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 STX4Q12846 297 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PDIA2Q13087 525 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 TRAF3Q13114 568 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 GPR17Q13304 367 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 RBM39Q14498 530 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 UPP1Q16831 310 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 ATP6V1FQ16864 119 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 RFX4Q33E94 735 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 FGD3Q5JSP0 725 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PAPPA-AS1Q5QFB9 102 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 C1orf220Q5T0J3 134 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 PDSS1Q5T2R2 415 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 SDHAF4Q5VUM1 108 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 LPCAT4Q643R3 524 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 APOBEC3HQ6NTF7 200 aaKnown RBP3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 C3orf33Q6P1S2 294 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 EMBQ6PCB8 327 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 SHC4Q6S5L8 630 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZNF836Q6ZNA1 936 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 Q6ZSR3 168 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 CYS1Q717R9 158 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 ZNF627Q7L945 461 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 CLIP4Q8N3C7 705 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 KIF2BQ8N4N8 673 aa3.87□□□□□ -1.79
HMGB3P21-201ENST00000452483 CCDC71LQ8N9Z2 235 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms