RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 RALYQ9UKM9 306 aaKnown RBP10.36□□□□□ -0.75
SCN9A-204ENST00000452182 FAM215AQ9Y5M1 114 aa10.36□□□□□ -0.75
SCN9A-204ENST00000452182 PHF3Q92576 2039 aaKnown RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 MBD3L4A6NDZ8 208 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 MBD3L3A6NE82 208 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 MBD3L5A6NJ08 208 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 AQP7P3A6NL99 342 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 LRRN3E7EW58 273 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 E9PLN8 166 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 SMAD9O15198 467 aaKnown RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 CYTIPO60759 359 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 VAMP5O95183 116 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 TSPAN19P0C672 248 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 FUT1P19526 365 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 FPR3P25089 353 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 GTF2E2P29084 291 aaKnown RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 GRPRP30550 384 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 TIMP3P35625 211 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 PPP1R8Q12972 351 aaKnown RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 PDK3Q15120 406 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 RNPS1Q15287 305 aaKnown RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 IGFBP7Q16270 282 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 ABLIM2Q6H8Q1 611 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 PGBD2Q6P3X8 592 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 B3GNT6Q6ZMB0 384 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 H1FNTQ75WM6 255 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 FCRLAQ7L513 359 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 AMIGO2Q86SJ2 522 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 HIPK1Q86Z02 1210 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 SVOPLQ8N434 492 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 C10orf53Q8N6V4 93 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 OR5J2Q8NH18 312 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 MBD3L2Q8NHZ7 208 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 FNDC9Q8TBE3 224 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 GIPC3Q8TF64 312 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 RELTQ969Z4 430 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 TRIB1Q96RU8 372 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 TM9SF2Q99805 663 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 PKP2Q99959 881 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 VKORC1Q9BQB6 163 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 OCSTAMPQ9BR26 566 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 ASPNQ9BXN1 380 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 DCLRE1BQ9H816 532 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 RNF122Q9H9V4 155 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 GP6Q9HCN6 339 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 C6orf203Q9P0P8 240 aaPredicted RBP10.35□□□□□ -0.75
SCN9A-204ENST00000452182 TINAGQ9UJW2 476 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 MGAT4BQ9UQ53 548 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 POLEQ07864 2286 aa10.35□□□□□ -0.75
SCN9A-204ENST00000452182 LOC102725191A0A1B0GVB3 256 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 EFCAB9A8MZ26 197 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 H0YHG0 523 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 M0R082 166 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 CDC42EP2O14613 210 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 AKR7A3O95154 331 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 TGM6O95932 706 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 MAKP20794 623 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 GSSP48637 474 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 P2RY4P51582 365 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 SLC16A1P53985 500 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 RPS4XP62701 263 aaKnown RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 OTUD3Q5T2D3 398 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 GTF2IRD2BQ6EKJ0 949 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 RPTNQ6XPR3 784 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 GTF2IRD2Q86UP8 949 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 ZDHHC13Q8IUH4 622 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 OR10G2Q8NGC3 310 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF417Q8TAU3 575 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 DNAJA3Q96EY1 480 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 FAM46AQ96IP4 442 aaKnown RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 DMRTA2Q96SC8 542 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 ZNF587Q96SQ5 575 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 TTYH2Q9BSA4 534 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 SF3B5Q9BWJ5 86 aaKnown RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 OSBPL10Q9BXB5 764 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 DGCR6LQ9BY27 220 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 CHST11Q9NPF2 352 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 GLRX2Q9NS18 164 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 PDP1Q9P0J1 537 aaPredicted RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 STX18Q9P2W9 335 aaKnown RBP10.34□□□□□ -0.75
SCN9A-204ENST00000452182 OSGIN2Q9Y236 505 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 RASD1Q9Y272 281 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 HIF3AQ9Y2N7 669 aa10.34□□□□□ -0.75
SCN9A-204ENST00000452182 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 TRGV8A0A0C4DH27 118 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 A0A1B0GUH1 482 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ZNF814B7Z6K7 855 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 G3V2T6 193 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 AQP8O94778 261 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 RCBTB2O95199 551 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ADAP00813 363 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GASTP01350 101 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 HIST1H2ABP04908 130 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 SAGP10523 405 aaPredicted RBP10.33□□□□□ -0.76
SCN9A-204ENST00000452182 ANXA8P13928 327 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GSTM3P21266 225 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 CBLP22681 906 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GNLYP22749 145 aa10.33□□□□□ -0.76
SCN9A-204ENST00000452182 GPR4P46093 362 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms