RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 QPRTQ15274 297 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 OR1Q1Q15612 314 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ENTPD8Q5MY95 495 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 HBMQ6B0K9 141 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF613Q6PF04 617 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 LILRA2Q8N149 483 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 PACRGLQ8N7B6 248 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 LSMEM1Q8N8F7 131 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ATP6V1C2Q8NEY4 427 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 OR4D11Q8NGI4 311 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 DNAJA4Q8WW22 397 aaPredicted RBP15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ZNF524Q96C55 264 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ADGRG7Q96K78 797 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 PRRC1Q96M27 445 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 FNDC11Q9BVV2 318 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 ST6GALNAC2Q9UJ37 374 aa15.22■□□□□ 0.03
PRPF40A-204ENST00000450303 MED13LQ71F56 2210 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 C7orf72A4D263 438 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 TRAPPC13A5PLN9 417 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 CPSF4LA6NMK7 179 aaKnown RBP15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 ADAMDEC1O15204 470 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 OR5F1O95221 314 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 SYNGR4O95473 234 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 CST1P01037 141 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 THRBP10828 461 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 PRG2P13727 222 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 CD79BP40259 229 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 EIF1P41567 113 aaKnown RBP15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 HOXC5Q00444 222 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 ST3GAL3Q11203 375 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 NPTX1Q15818 432 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 ULK3Q6PHR2 472 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 RBM45Q8IUH3 476 aaKnown RBP15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 OR2V1Q8NHB1 315 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 LRTOMTQ8WZ04 291 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 OSTF1Q92882 214 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 SLCO4A1Q96BD0 722 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 DACH2Q96NX9 599 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 PIP5K1AQ99755 562 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 C9orf16Q9BUW7 83 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 ACER3Q9NUN7 267 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 NDUFAF4Q9P032 175 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 NDRG3Q9UGV2 375 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
PRPF40A-204ENST00000450303 HIVEP1P15822 2718 aa15.21■□□□□ 0.02
PRPF40A-204ENST00000450303 PRRC2AP48634 2157 aaKnown RBP15.21■□□□□ 0.02
PRPF40A-204ENST00000450303 CASKO14936 926 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 DEAF1O75398 565 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 PLGP00747 810 aaPredicted RBP15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 LYNP07948 512 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 FCGR2AP12318 317 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 POU2F1P14859 743 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 ADH6P28332 368 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 SLC1A3P43003 542 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 YAP1P46937 504 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 PDK3Q15120 406 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 GUSBP1Q15486 140 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 EXOC3L2Q2M3D2 409 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 ESPNLQ6ZVH7 1005 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 FAM214BQ7L5A3 538 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 GRINAQ7Z429 371 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 RNF217Q8TC41 542 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 ADAMTS16Q8TE57 1224 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 ROBO4Q8WZ75 1007 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 SLC41A3Q96GZ6 507 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 MRGPRX4Q96LA9 322 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 KLHL15Q96M94 604 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 WFDC6Q9BQY6 131 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 C12orf10Q9HB07 376 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 MCTS1Q9ULC4 181 aaKnown RBP15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 CELSR1Q9NYQ6 3014 aa15.2■□□□□ 0.02
PRPF40A-204ENST00000450303 TPST2O60704 377 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 TIPRLO75663 272 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 HRGP04196 525 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 H1F0P07305 194 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 CD8BP10966 210 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 PNMTP11086 282 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 PRKCAP17252 672 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 DNASE1P24855 282 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 HTR2AP28223 471 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 APOBEC1P41238 236 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 POLR2HP52434 150 aaKnown RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 CTBP2P56545 445 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 CARD18P57730 90 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 SPIBQ01892 262 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 PIN1Q13526 163 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 GK3PQ14409 553 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 TRAM2Q15035 370 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 TMEM176BQ3YBM2 270 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 ALG10BQ5I7T1 473 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 PDSS1Q5T2R2 415 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 ANKRD34AQ69YU3 496 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 OR2T5Q6IEZ7 315 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 SPNS3Q6ZMD2 512 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 ZBTB49Q6ZSB9 765 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 OFCC1Q8IZS5 231 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 GALNT4Q8N4A0 578 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 PIK3C3Q8NEB9 887 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 OR2T29Q8NH02 315 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms