RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ASB11Q8WXH4 323 aa12.96□□□□□ -0.33
ITGB4-202ENST00000449880 SAMD10Q9BYL1 202 aa12.96□□□□□ -0.33
ITGB4-202ENST00000449880 GOLGA4Q13439 2230 aaKnown RBP12.96□□□□□ -0.34
ITGB4-202ENST00000449880 HNRNPA2B1P22626 353 aaKnown RBP12.96□□□□□ -0.34
ITGB4-202ENST00000449880 CX3CR1P49238 355 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 CLDN6P56747 220 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 RAB4BP61018 213 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 CHRNEQ04844 493 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 EXOSC2Q13868 293 aaKnown RBP12.96□□□□□ -0.34
ITGB4-202ENST00000449880 STK11Q15831 433 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 FIGNL1Q6PIW4 674 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 CD300LGQ6UXG3 332 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.34
ITGB4-202ENST00000449880 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 ARRDC2Q8TBH0 407 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 NICN1Q9BSH3 213 aa12.96□□□□□ -0.34
ITGB4-202ENST00000449880 A0A0B4J2A0 478 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 LRIT2A6NDA9 550 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PAPLNO95428 1278 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 OTX2P32243 289 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 AHRP35869 848 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 ZNF542PQ5EBM4 170 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PNPLA1Q8N8W4 532 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 CYB561A3Q8NBI2 242 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 TRMT2BQ96GJ1 504 aaKnown RBP12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PITX2Q99697 317 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 CLSTN3Q9BQT9 956 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 IL20RAQ9UHF4 553 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SHPKQ9UHJ6 478 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 ENTPD2Q9Y5L3 495 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SCGB1D1O95968 90 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 DRD1P21728 446 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 VIPR2P41587 438 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 HBA1P69905 142 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 STEAP1BQ6NZ63 245 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 RGS13O14921 159 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 NLRC3Q7RTR2 1065 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PRSS42Q7Z5A4 293 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 TRAPPC6BQ86SZ2 158 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SKA3Q8IX90 412 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PIANPQ8IYJ0 282 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 ISG20Q96AZ6 181 aaKnown RBP12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PLEKHA3Q9HB20 300 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PSMB10P40306 273 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 RFX2P48378 723 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 TNK1Q13470 666 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SH2D5Q6ZV89 423 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 CDH26Q8IXH8 852 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 MIB2Q96AX9 1013 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 WDR83Q9BRX9 315 aaKnown RBP12.95□□□□□ -0.34
ITGB4-202ENST00000449880 ADAMTSL1Q8N6G6 1762 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 A0A0A6YYJ9 748 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 HMX2A2RU54 273 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 HMGN2P05204 90 aaKnown RBP12.95□□□□□ -0.34
ITGB4-202ENST00000449880 MSR1P21757 451 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 AOAHP28039 575 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SHC1P29353 583 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 SLC5A12Q1EHB4 618 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 TEX261Q6UWH6 196 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 USP51Q70EK9 711 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 CCDC190Q86UF4 302 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 TAS2R16Q9NYV7 291 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 U3KQ87 197 aa12.95□□□□□ -0.34
ITGB4-202ENST00000449880 LILRB3O75022 631 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 MC3RP41968 323 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 TAS2R30P59541 319 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 SLC35D3Q5M8T2 416 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 OR6F1Q8NGZ6 308 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 NEIL2Q969S2 332 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 OR7D2Q96RA2 312 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 NIPSNAP3BQ9BS92 247 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 SCPEP1Q9HB40 452 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 B3GALT1Q9Y5Z6 326 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 SGK494L7N484 410 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 SURF4O15260 269 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 ZNF266Q14584 549 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 MELKQ14680 651 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 FAM26EQ8N5C1 309 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 HSFX1Q9UBD0 423 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 LY75O60449 1722 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 DCDC2BA2VCK2 349 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 CLEC2LP0C7M8 214 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 NAGAP17050 411 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 CCR6P51684 374 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 AQP6Q13520 282 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 MPEG1Q2M385 716 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 MDGA2Q7Z553 956 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 CD163Q86VB7 1156 aa12.94□□□□□ -0.34
ITGB4-202ENST00000449880 KDM8Q8N371 416 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms