RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ST6GALNAC3Q8NDV1 305 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ADPRHL1Q8NDY3 354 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 OR5M9Q8NGP3 310 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 OR13C2Q8NGS9 318 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF417Q8TAU3 575 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 FAM57AQ8TBR7 257 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 MAGEE2Q8TD90 523 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 HIST1H2ACQ93077 130 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 SLC29A1Q99808 456 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 TUBA1CQ9BQE3 449 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 NAA11Q9BSU3 229 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 UCK2Q9BZX2 261 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 SMURF2Q9HAU4 748 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 PNPLA3Q9NST1 481 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 MRPL39Q9NYK5 338 aaKnown RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
SHANK2-210ENST00000449116 B3GALT5Q9Y2C3 310 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 POFUT2Q9Y2G5 429 aa13.11□□□□□ -0.31
SHANK2-210ENST00000449116 TRAV27A0A087WT01 109 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 AQP7P3A6NL99 342 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 AHRRA9YTQ3 701 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 SYNGR4O95473 234 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 HPRP00739 348 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 ALPLP05186 524 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 ENPP1P22413 925 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 IGFBP5P24593 272 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 RPS4XP62701 263 aaKnown RBP13.1□□□□□ -0.31
SHANK2-210ENST00000449116 H3F3AP84243 136 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 PMS2P3Q13401 168 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 SF3B4Q15427 424 aaKnown RBP eCLIP13.1□□□□□ -0.31
SHANK2-210ENST00000449116 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 PPP4R4Q6NUP7 873 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 KLHL17Q6TDP4 642 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 H1FNTQ75WM6 255 aaPredicted RBP13.1□□□□□ -0.31
SHANK2-210ENST00000449116 CD163Q86VB7 1156 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 PACRGLQ8N7B6 248 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 TMEM99Q8N816 258 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 OR51A7Q8NH64 312 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 CHST11Q9NPF2 352 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 PAPOLBQ9NRJ5 636 aaKnown RBP13.1□□□□□ -0.31
SHANK2-210ENST00000449116 KRT84Q9NSB2 600 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 SEC14L4Q9UDX3 406 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 HIF3AQ9Y2N7 669 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF835Q9Y2P0 537 aa13.1□□□□□ -0.31
SHANK2-210ENST00000449116 NBEAQ8NFP9 2946 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 FIGNL2A6NMB9 653 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 CLCA1A8K7I4 914 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 BLOC1S5-TXNDC5H3BN57 136 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PLPP3O14495 311 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PRRG2O14669 202 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
SHANK2-210ENST00000449116 WDR1O75083 606 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PTP4A3O75365 173 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 OR6A2O95222 327 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 TSPAN19P0C672 248 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 GABRA1P14867 456 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PTGER4P35408 488 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PTDSS1P48651 473 aaKnown RBP13.09□□□□□ -0.31
SHANK2-210ENST00000449116 P2RY4P51582 365 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PRPS1P60891 318 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 IL1RL1Q01638 556 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 FHL1Q13642 323 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PON3Q15166 354 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 TAF11Q15544 211 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 EMC4Q5J8M3 183 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 RPL13AP3Q6NVV1 102 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF585AQ6P3V2 769 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 IGSF10Q6WRI0 2623 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF620Q6ZNG0 422 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 FCRLAQ7L513 359 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ADGRE4PQ86SQ3 457 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 PARP8Q8N3A8 854 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 CLDN22Q8N7P3 220 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 FANK1Q8TC84 345 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 TNFRSF13CQ96RJ3 184 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 RASSF4Q9H2L5 321 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 VCXQ9H320 206 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 VCX3BQ9H321 246 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 MCCC2Q9HCC0 563 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 REV1Q9UBZ9 1251 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 TMEFF2Q9UIK5 374 aaPredicted RBP13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ZNF175Q9Y473 711 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 ORC6Q9Y5N6 252 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 SVILO95425 2214 aa13.09□□□□□ -0.31
SHANK2-210ENST00000449116 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 ZNF814B7Z6K7 855 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 SLC19A2O60779 497 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
SHANK2-210ENST00000449116 NDUFB2O95178 105 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 VAMP5O95183 116 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 RCBTB2O95199 551 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 ADORA3P0DMS8 318 aa13.08□□□□□ -0.32
SHANK2-210ENST00000449116 OSMP13725 252 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms