RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PPP1R8Q12972 351 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 CELF3Q5SZQ8 465 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 PRSS35Q8N3Z0 413 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 FCRL5Q96RD9 977 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 PSMG3Q9BT73 122 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SEMA4GQ9NTN9 838 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 RHCGQ9UBD6 479 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 F3P13726 295 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 PSMB1P20618 241 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SSTR2P30874 369 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 SLC9A3R2Q15599 337 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 HSD17B13Q7Z5P4 300 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GPX8Q8TED1 209 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 PKIBQ9C010 78 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 RNF19AQ9NV58 838 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 OR52A1Q9UKL2 312 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 OR7C2O60412 319 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 OR7C1O76099 320 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 FAM87AP0C7U9 286 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 HMGCLP35914 325 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 KIR2DL3P43628 341 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 HTR5AP47898 357 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GOLGA7Q7Z5G4 137 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 OR1L3Q8NH93 324 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 KCNG3Q8TAE7 436 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 HMGB4Q8WW32 186 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 ZBTB45Q96K62 511 aaPredicted RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 GSTO2Q9H4Y5 243 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 POPDC3Q9HBV1 291 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
NIPBL-202ENST00000448238 NDRG2Q9UN36 371 aaKnown RBP8.38□□□□□ -1.07
NIPBL-202ENST00000448238 TTC24A2A3L6 582 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 MEIS3P1A6NDR6 274 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GPRIN2O60269 458 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OPRL1P41146 370 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GPR12P47775 334 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 FCN2Q15485 313 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR8G2PQ6IF36 304 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 LSRQ86X29 649 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NTPCRQ9BSD7 190 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 DECR2Q9NUI1 292 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR2T8A6NH00 312 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 A8MT66 165 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 C5AR1P21730 350 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GRPRP30550 384 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ELOBQ15370 118 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 EXT1Q16394 746 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OTUD1Q5VV17 481 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 PLXDC1Q8IUK5 500 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR13C4Q8NGS5 318 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 KCNJ15Q99712 375 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 EEDO75530 441 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 PCGF2P35227 344 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 CPOXP36551 454 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR2B8PP59922 312 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 C17orf107Q6ZR85 190 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 VASH2Q86V25 355 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 CLEC10AQ8IUN9 316 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF738Q8NE65 137 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR4K13Q8NH42 304 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ALG3Q92685 438 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 MYADMQ96S97 322 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SPAG8Q99932 426 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 MVB12BQ9H7P6 319 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GABRQQ9UN88 632 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ROBO3Q96MS0 1386 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 CCL16O15467 120 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ADAM23O75077 832 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SOCS5O75159 536 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 KLF7O75840 302 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR2F2O95006 317 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 OR13C7P0DN81 318 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SOX18P35713 384 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SFT2D3Q587I9 215 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 TOMM20LQ6UXN7 152 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SLC24A5Q71RS6 500 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ASPGQ86U10 573 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 LGI3Q8N145 548 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 SMIM7Q9BQ49 75 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 TBX19O60806 448 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 IGKV5-2P06315 115 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ATXN1LP0C7T5 689 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 WASP42768 502 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 GTDC1Q4AE62 458 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NCR3LG1Q68D85 454 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 TSEN54Q7Z6J9 526 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 RPL3LQ92901 407 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 NECAP2Q9NVZ3 263 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 POLLQ9UGP5 575 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 TMEM98Q9Y2Y6 226 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 ZNF320A2RRD8 509 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 FABP7O15540 132 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 LRCH4O75427 683 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 POP7O75817 140 aaKnown RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 PMCHP20382 165 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 CARD18P57730 90 aa8.37□□□□□ -1.07
NIPBL-202ENST00000448238 HOXA4Q00056 320 aaPredicted RBP8.37□□□□□ -1.07
NIPBL-202ENST00000448238 YRDCQ86U90 279 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms