RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 FN3KQ9H479 309 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 FBXO4Q9UKT5 387 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 KCNE3Q9Y6H6 103 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 UNC13CQ8NB66 2214 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 TMEM72A0PK05 275 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SOCS6O14544 535 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 LRRTM2O43300 516 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 LILRB5O75023 590 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 RBBP9O75884 186 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 MAGEA2P43356 314 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 BMXP51813 675 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SNU13P55769 128 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 DEFB109BQ30KR1 87 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SPIN3Q5JUX0 258 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 HES5Q5TA89 166 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLX4IPQ5VYV7 408 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLC16A14Q7RTX9 510 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 FNDC8Q8TC99 324 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ASB17Q8WXJ9 295 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLCO4A1Q96BD0 722 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 RASD2Q96D21 266 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 Q96M85 177 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLC38A1Q9H2H9 487 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ERVMER34-1Q9H9K5 563 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ZNF639Q9UID6 485 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 AK6Q9Y3D8 172 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 CDK4P11802 303 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SCRN3Q0VDG4 424 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SF3A2Q15428 464 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 AWAT2Q6E213 333 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 BOLLQ8N9W6 283 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 MINDY2Q8NBR6 621 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 CCDC54Q8NEL0 328 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 OR4N2Q8NGD1 307 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ZNF417Q8TAU3 575 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 TCEAL3Q969E4 200 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 LMF1Q96S06 567 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 BCL7BQ9BQE9 202 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 NUFIP1Q9UHK0 495 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 KLF13Q9Y2Y9 288 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 A0A1W2PPV9 198 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 TOX3O15405 576 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 EEF1E1O43324 174 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 BCAS1O75363 584 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 RAD51DO75771 328 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 THBS2P35442 1172 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ART1P52961 327 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SIRPAP78324 504 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 RSU1Q15404 277 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 CCDC92Q53HC0 331 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 BCDIN3DQ7Z5W3 292 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 TMED4Q7Z7H5 227 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 NAXDQ8IW45 347 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 LRRC56Q8IYG6 542 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 OR5T2Q8NGG2 359 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 TRIM63Q969Q1 353 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SGCZQ96LD1 299 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ZNF701Q9NV72 531 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 KLHL13Q9P2N7 655 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 PSORS1C1Q9UIG5 152 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 HHLA2Q9UM44 414 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 EMC9Q9Y3B6 208 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 DISC1C4P0D8 188 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 M0R082 166 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 CD3GP09693 182 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 OR8G3PP0DMU2 310 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 FKBP2P26885 142 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 AVPR2P30518 371 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 MRPL19P49406 292 aaKnown RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 MAN2A2P49641 1150 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 RGS6P49758 472 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 EMDP50402 254 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 PWWP2BQ6NUJ5 590 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 WDR74Q6RFH5 385 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 DPY19L4Q7Z388 723 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 KCTD20Q7Z5Y7 419 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SFTPA2Q8IWL1 248 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLC22A18ASQ8N1D0 253 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 OR2L13Q8N349 312 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SLC43A2Q8N370 569 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ZNF565Q8N9K5 539 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 FAM46BQ96A09 425 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 GIMAP5Q96F15 307 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ZNF587Q96SQ5 575 aaPredicted RBP6.8□□□□□ -1.32
SYNE1-213ENST00000448038 FUZQ9BT04 418 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 MENTQ9BUN1 341 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 CHIAQ9BZP6 476 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 C1orf198Q9H425 327 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 ENPP5Q9UJA9 477 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 SCP2D1Q9UJQ7 156 aa6.8□□□□□ -1.32
SYNE1-213ENST00000448038 METTL15A6NJ78 407 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 D6RAR5 112 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 GPR171O14626 319 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 WISP3O95389 354 aaPredicted RBP6.79□□□□□ -1.32
SYNE1-213ENST00000448038 TPOP07202 933 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 SLC2A5P22732 501 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 IL32P24001 234 aa6.79□□□□□ -1.32
SYNE1-213ENST00000448038 GCH1P30793 250 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms