RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 GALNT5Q7Z7M9 940 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 GPAT4Q86UL3 456 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 CCDC103Q8IW40 242 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 FAM86B1Q8N7N1 296 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 TMEM99Q8N816 258 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 TMEM239Q8WW34 195 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 ZNF300Q96RE9 604 aaPredicted RBP11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 PRSS27Q9BQR3 290 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 ZNF426Q9BUY5 554 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 ANKRD19PQ9H560 264 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 B3GALT5Q9Y2C3 310 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 MED31Q9Y3C7 131 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 KIAA1549Q9HCM3 1950 aa11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 DIDO1Q9BTC0 2240 aaKnown RBP11.65□□□□□ -0.54
ERGIC3-209ENST00000447986 IGKV3D-15A0A087WSY6 115 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 HTR3EA5X5Y0 456 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 A8MXE2 369 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FTCDNL1E5RQL4 147 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 J3KTA2 159 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 hCG_2039718K7EN88 272 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KPNA4O00629 521 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 LYPD3O95274 346 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 MT-ND1P03886 318 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 PTNP21246 168 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ATP6V1B2P21281 511 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 GRPRP30550 384 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 UQCRC1P31930 480 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 SMIM11AP58511 58 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 MS4A2Q01362 244 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FOXD4Q12950 439 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FBXL19-AS1Q494R0 122 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 WDR88Q6ZMY6 472 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 H1FNTQ75WM6 255 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KIF18BQ86Y91 864 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 NKAIN4Q8IVV8 208 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 TMEM255BQ8WV15 326 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF347Q96SE7 839 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 RBM24Q9BX46 236 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 C12orf49Q9H741 205 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 PARPBPQ9NWS1 579 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 NDUFAF4Q9P032 175 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 JKAMPQ9P055 326 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 RHCGQ9UBD6 479 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 NOSIPQ9Y314 301 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 TENM4Q6N022 2769 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF716A6NP11 495 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 M0R082 166 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 IGF2P01344 180 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 HIST1H2ABP04908 130 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 H1F0P07305 194 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 UMPSP11172 480 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 HOXB6P17509 224 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KLK2P20151 261 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 CBLP22681 906 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 VLDLRP98155 873 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 IL1RL1Q01638 556 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 CHRNB3Q05901 458 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FLOT2Q14254 428 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FAM98BQ52LJ0 330 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 PGM2L1Q6PCE3 622 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 HIST3H2AQ7L7L0 130 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF100Q8IYN0 542 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 CDK20Q8IZL9 346 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 RNF113BQ8IZP6 322 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 SCAIQ8N9R8 606 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ADPRHL1Q8NDY3 354 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF417Q8TAU3 575 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 HIST1H2ACQ93077 130 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 C7orf34Q96L11 122 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF587Q96SQ5 575 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 SEPHS2Q99611 448 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 PIP5K1AQ99755 562 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 CADM1Q9BY67 442 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KRTAP3-3Q9BYR6 98 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 LRMDAQ9H2I8 198 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 MAGIXQ9H6Y5 334 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 FKRPQ9H9S5 495 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 NMNAT1Q9HAN9 279 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 IL1RAPQ9NPH3 570 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 KRCC1Q9NPI7 259 aaPredicted RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 NANSQ9NR45 359 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 MRPL39Q9NYK5 338 aaKnown RBP11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 ELOVL5Q9NYP7 299 aa11.64□□□□□ -0.55
ERGIC3-209ENST00000447986 AQP12BA6NM10 295 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 ZNF814B7Z6K7 855 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 FFAR1O14842 300 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 FZD7O75084 574 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 MRPL33O75394 65 aaKnown RBP11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 OR6A2O95222 327 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 CH25HO95992 272 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 CGAP01215 116 aa11.63□□□□□ -0.55
ERGIC3-209ENST00000447986 BGLAPP02818 100 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms