RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CCDC103Q8IW40 242 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 SVOPLQ8N434 492 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 FNDC9Q8TBE3 224 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZPLD1Q8TCW7 415 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 CPNE4Q96A23 557 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 NIPSNAP1Q9BPW8 284 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ASPNQ9BXN1 380 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 CHST11Q9NPF2 352 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 KRCC1Q9NPI7 259 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 TIGARQ9NQ88 270 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 ZNF229Q9UJW7 825 aa16.09■□□□□ 0.17
TRAPPC4-203ENST00000447216 TRAV27A0A087WT01 109 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ARRDC5A6NEK1 342 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 UNC119BA6NIH7 251 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 AHRRA9YTQ3 701 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 SMAD9O15198 467 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 FZD7O75084 574 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 AQP8O94778 261 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ATP6V1G2O95670 118 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 TGM6O95932 706 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 HIST1H2ABP04908 130 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ASAH2BP0C7U1 165 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 AGFG1P52594 562 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 NUP107P57740 925 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 PMS2P3Q13401 168 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 TRIP10Q15642 601 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 C1orf185Q5T7R7 199 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 RTL6Q6ICC9 239 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 RPTNQ6XPR3 784 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 Q6ZPB1 254 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 HIST3H2AQ7L7L0 130 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 NANOGNBQ7Z5D8 188 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZDHHC13Q8IUH4 622 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 RPRMLQ8N4K4 120 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ATG16L2Q8NAA4 619 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR5J2Q8NH18 312 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 OR51A7Q8NH64 312 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 HIST1H2ACQ93077 130 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 ZHX1-C8orf76Q96EF9 292 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 PSD2Q9BQI7 771 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 NAA11Q9BSU3 229 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 PRRG4Q9BZD6 226 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 GABARAPL1Q9H0R8 117 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 KIF17Q9P2E2 1029 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 KLHL13Q9P2N7 655 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 CLCF1Q9UBD9 225 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 MGAT4BQ9UQ53 548 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 OSGIN2Q9Y236 505 aa16.08■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC22A20A6NK97 555 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FIGNL2A6NMB9 653 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 DNPH1O43598 174 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 WDR1O75083 606 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FPR3P25089 353 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 ACVR2AP27037 513 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 DAPP51397 102 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 P2RY4P51582 365 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 TSPAN31Q12999 210 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 RIPK1Q13546 671 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FHL1Q13642 323 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 MFSD13AQ14CX5 517 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 LPCAT4Q643R3 524 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 PAQR6Q6TCH4 344 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 H1FNTQ75WM6 255 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FCRLAQ7L513 359 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 P4HA3Q7Z4N8 544 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 ADGRE4PQ86SQ3 457 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 OAFQ86UD1 273 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 KDM8Q8N371 416 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 MOSPD2Q8NHP6 518 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 LIPHQ8WWY8 451 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 SDCCAG3Q96C92 435 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 TNFRSF13CQ96RJ3 184 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 DGCR6LQ9BY27 220 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 PAQR5Q9NXK6 330 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 MRPL39Q9NYK5 338 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 MCTS1Q9ULC4 181 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FAM215AQ9Y5M1 114 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 CORINQ9Y5Q5 1042 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 FREM1Q5H8C1 2179 aa16.07■□□□□ 0.16
TRAPPC4-203ENST00000447216 TRGV8A0A0C4DH27 118 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 HTR3EA5X5Y0 456 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 AQP7P3A6NL99 342 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 C11orf98E9PRG8 122 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 MS4A18H0YCH9 400 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 BLOC1S5-TXNDC5H3BN57 136 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 PLPP3O14495 311 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 SOCS2O14508 198 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 EIF1BO60739 113 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 HPRP00739 348 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 ADAP00813 363 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 ANXA8P13928 327 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 GABRA1P14867 456 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 PEX2P28328 305 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 AQP2P41181 271 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 H3F3AP84243 136 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 IL1RL1Q01638 556 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 SLC34A1Q06495 639 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 LRRC36Q1X8D7 754 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 MS4A18Q3C1V0 323 aa16.06■□□□□ 0.16
TRAPPC4-203ENST00000447216 FAHD1Q6P587 224 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms