RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 LYPD4Q6UWN0 246 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 MARCH9Q86YJ5 346 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 FAM83FQ8NEG4 500 aaPredicted RBP15.85■□□□□ 0.13
SMC6-206ENST00000446852 PMEPA1Q969W9 287 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 CNN2Q99439 309 aaKnown RBP15.85■□□□□ 0.13
SMC6-206ENST00000446852 FBXO4Q9UKT5 387 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 J3QLW9 94 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 BGLAPP02818 100 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 ZNF19P17023 458 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 GTF2E2P29084 291 aaKnown RBP15.85■□□□□ 0.13
SMC6-206ENST00000446852 DIO1P49895 249 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 CAV3P56539 151 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 CTXN1P60606 82 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 RUNX1T1Q06455 604 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 GPR50Q13585 617 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 IL11RAQ14626 422 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 TRIM16LQ309B1 348 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 OR5M10Q6IEU7 315 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 LEG1Q6P5S2 330 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 TMEM205Q6UW68 189 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 NUP54Q7Z3B4 507 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 NANOGNBQ7Z5D8 188 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 LYSMD2Q8IV50 215 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 LSM14AQ8ND56 463 aaKnown RBP15.85■□□□□ 0.13
SMC6-206ENST00000446852 ASB15Q8WXK1 588 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 COQ7Q99807 217 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 POLE4Q9NR33 117 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 ZNF229Q9UJW7 825 aa15.85■□□□□ 0.13
SMC6-206ENST00000446852 C2orf72A6NCS6 295 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 CPNE3O75131 537 aaKnown RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 CCL4P13236 92 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 DUSP3P51452 185 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 E2F1Q01094 437 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 ZFP36L1Q07352 338 aaKnown RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 PON3Q15166 354 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 CLPPQ16740 277 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 TCEAL6Q6IPX3 200 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 FAM199XQ6PEV8 388 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 RPTNQ6XPR3 784 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 VASH1Q7L8A9 365 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 POMGNT2Q8NAT1 580 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 NLGN4YQ8NFZ3 816 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 OR5J2Q8NH18 312 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 TCEAL3Q969E4 200 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 SLC30A2Q9BRI3 323 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 FKRPQ9H9S5 495 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 PCDHGB6Q9Y5F9 930 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 MAGEB4O15481 346 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 SYPP08247 313 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 APEHP13798 732 aaKnown RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 TGM1P22735 817 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 SLC26A5P58743 744 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 DNASE1L3Q13609 305 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 EFR3AQ14156 821 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 COL28A1Q2UY09 1125 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 LCN1P1Q5VSP4 162 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 STEAP3Q658P3 488 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 GPALPP1Q8IXQ4 340 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 SDHCQ99643 169 aaPredicted RBP15.84■□□□□ 0.13
SMC6-206ENST00000446852 PTDSS2Q9BVG9 487 aa15.84■□□□□ 0.13
SMC6-206ENST00000446852 SELENOFO60613 162 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 SDHAP31040 664 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 POLR2HP52434 150 aaKnown RBP15.83■□□□□ 0.12
SMC6-206ENST00000446852 LGALS3BPQ08380 585 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 LINC01590Q5TEZ4 76 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 ARL9Q6T311 187 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 ADGRG3Q86Y34 549 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 AGBL5Q8NDL9 886 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 OR6K6Q8NGW6 343 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 NEIL3Q8TAT5 605 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 HGDQ93099 445 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 CEP19Q96LK0 163 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TSSK2Q96PF2 358 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TSPAN32Q96QS1 320 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 CCDC86Q9H6F5 360 aaKnown RBP15.83■□□□□ 0.12
SMC6-206ENST00000446852 GALNT9Q9HCQ5 603 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 RPRD1BQ9NQG5 326 aaKnown RBP15.83■□□□□ 0.12
SMC6-206ENST00000446852 RXFP3Q9NSD7 469 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TBCCD1Q9NVR7 557 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TAS2R10Q9NYW0 307 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 SLC6A5Q9Y345 797 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TRAV36DV7A0A075B6V5 113 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TMED7-TICAM2A0A0A6YYA0 188 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TMEM72A0PK05 275 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 TMEM221A6NGB7 291 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 M0R296 226 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 SUSD5O60279 629 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 NPIPB7O75200 414 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 GAAP10253 952 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 ZNF181Q2M3W8 571 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.83■□□□□ 0.12
SMC6-206ENST00000446852 TP53I3Q53FA7 332 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 SLC35D3Q5M8T2 416 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 PLEKHG7Q6ZR37 379 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 BPHLQ86WA6 291 aaPredicted RBP15.83■□□□□ 0.12
SMC6-206ENST00000446852 SLC35F2Q8IXU6 374 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 EXD3Q8N9H8 876 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 NPAS1Q99742 590 aa15.83■□□□□ 0.12
SMC6-206ENST00000446852 ZNF346Q9UL40 294 aaKnown RBP15.83■□□□□ 0.12
SMC6-206ENST00000446852 POLHQ9Y253 713 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms