RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	OR56A1	Q8NGH5	318 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	WNT2B	Q93097	391 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SDF2	Q99470	211 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SOST	Q9BQB4	213 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	MED18	Q9BUE0	208 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	C20orf85	Q9H1P6	137 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	LDAH	Q9H6V9	325 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	DLL4	Q9NR61	685 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SLC22A11	Q9NSA0	550 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ASH2L	Q9UBL3	628 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	GLS2	Q9UI32	602 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	FKBP7	Q9Y680	259 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	hCG_1807616	A0A1W2PRN6	198 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	EFEMP2	O95967	443 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	CISD3	P0C7P0	127 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	FPR3	P25089	353 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ACTR1B	P42025	376 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ACTR1A	P61163	376 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	GSG1	Q2KHT4	349 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	C2orf68	Q2NKX9	166 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF658B	Q4V348	819 aa	Predicted RBP	11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	TIGD3	Q6B0B8	471 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	LIN54	Q6MZP7	749 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	FGD2	Q7Z6J4	655 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	PRSS58	Q8IYP2	241 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	OR2L5	Q8NG80	312 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	OR5M1	Q8NGP8	315 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	OR10AC1	Q8NH08	325 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ZDHHC1	Q8WTX9	485 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ADAMTS14	Q8WXS8	1223 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	NXPE2	Q96DL1	559 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	FGF22	Q9HCT0	170 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	PRSS16	Q9NQE7	514 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	TBC1D29	Q9UFV1	150 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SLC6A5	Q9Y345	797 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SGK494	L7N484	410 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	HTR3B	O95264	441 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	NGFR	P08138	427 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	STAT5A	P42229	794 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	PSMA6	P60900	246 aa	Known RBP	11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	CAMK2D	Q13557	499 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	CLLU1	Q5K131	121 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	SLC6A19	Q695T7	634 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	HEPHL1	Q6MZM0	1159 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	CNKSR3	Q6P9H4	555 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	CD200R1L	Q6Q8B3	271 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	DGAT2L6	Q6ZPD8	337 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	LMF1	Q96S06	567 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	GSX2	Q9BZM3	304 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312	FBXL3	Q9UKT7	428 aa		11.54	□□□□□ -0.56
DDR1-238	ENST00000446312		A0A1W2PQU0	124 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312		L7N2F9	121 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	GATC	O43716	136 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	FGF17	O60258	216 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	CBR1	P16152	277 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	PCP4	P48539	62 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	EEF1A1	P68104	462 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	FAM53B	Q14153	422 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	ETFDH	Q16134	617 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	EEF1A1P5	Q5VTE0	462 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	MRM1	Q6IN84	353 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	RAB42	Q8N4Z0	105 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	WDR77	Q9BQA1	342 aa	Predicted RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	C1QTNF2	Q9BXJ5	285 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	ARL6	Q9H0F7	186 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	HEXA-AS1	Q9H8Q6	139 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	BIN3	Q9NQY0	253 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	FBXL2	Q9UKC9	423 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	MED31	Q9Y3C7	131 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	SDK2	Q58EX2	2172 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312		A0A0G2JK05	382 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312		A0A1B0GVI7	797 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	MCIDAS	D6RGH6	385 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	HCRTR1	O43613	425 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	CTSV	O60911	334 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	CD63	P08962	238 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	ZNF136	P52737	540 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	TMPRSS12	Q86WS5	348 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	ZFP82	Q8N141	532 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	LRRC25	Q8N386	305 aa	Predicted RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	STPG2	Q8N412	459 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	PELI1	Q96FA3	418 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	AHCYL2	Q96HN2	611 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	PAWR	Q96IZ0	340 aa	Known RBP	11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	PRSS27	Q9BQR3	290 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	LRRK1	Q38SD2	2015 aa		11.53	□□□□□ -0.56
DDR1-238	ENST00000446312	SLC22A23	A1A5C7	686 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	SOX1	O00570	391 aa	Predicted RBP	11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	PLG	P00747	810 aa	Predicted RBP	11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	RPN2	P04844	631 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	DRD2	P14416	443 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	PTAFR	P25105	342 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	MAT1A	Q00266	395 aa	Known RBP	11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	C1orf61	Q13536	156 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	LINC00303	Q3SY05	128 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	DCST2	Q5T1A1	773 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	KIAA1211L	Q6NV74	962 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	LRRC69	Q6ZNQ3	347 aa		11.52	□□□□□ -0.56
DDR1-238	ENST00000446312	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.52	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms