RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF146Q15072 292 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 CCL14Q16627 93 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 DUSP7Q16829 419 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 Q3ZCU0 254 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 C14orf28Q4W4Y0 310 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SLC22A10Q63ZE4 541 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF772Q68DY9 489 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF57Q68EA5 555 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 BEST4Q8NFU0 473 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR52H1Q8NGJ2 320 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR4A4PQ8NGN8 299 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 DTX3LQ8TDB6 740 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 GPR151Q8TDV0 419 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SSC4DQ8WTU2 575 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 C9orf85Q96MD7 179 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 CYP2S1Q96SQ9 504 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 LGMNQ99538 433 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 GAL3ST1Q99999 423 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF385DQ9H6B1 395 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 THAP10Q9P2Z0 257 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SLC2A6Q9UGQ3 507 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 TMCO1Q9UM00 188 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 SPATA2Q9UM82 520 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 COPS3Q9UNS2 423 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 ERVW-1Q9UQF0 538 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 AUP1Q9Y679 476 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 CAMSAP1Q5T5Y3 1602 aa3.55□□□□□ -1.84
HMGB1P48-201ENST00000446155 CPS1P31327 1500 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 TCOF1Q13428 1488 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 NOTCH3Q9UM47 2321 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGHV3OR16-12A0A075B7B8 117 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGHV4-30-2A0A087WSY4 118 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 A0A1W2PPV4 95 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SMCO2A6NFE2 343 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 IDSB3KWA1 339 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 E7ESA3 106 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 BCKDKO14874 412 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SNAP91O60641 907 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 LYPD3O95274 346 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 LGALS2P05162 132 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 CD55P08174 381 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 HCKP08631 526 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 ANXA5P08758 320 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 EIF2S2P20042 333 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 IFNA8P32881 189 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SPRP35270 261 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSD17B2P37059 387 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RFX3P48380 749 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 CSRP3P50461 194 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 ATP4BP51164 291 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RIDAP52758 137 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 NDUFV3P56181 108 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RPS14P62263 151 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SCRN3Q0VDG4 424 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 GRB7Q14451 532 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 EIPR1Q53HC9 387 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 C9orf135Q5VTT2 229 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SLC16A14Q7RTX9 510 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 VRK2Q86Y07 508 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 NUDCD3Q8IVD9 361 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 MMAAQ8IVH4 418 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 Q8N377 158 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIML2Q8N7C3 387 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 TPRX1Q8N7U7 411 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR52I1Q8NGK6 324 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 FLVCR1-AS1Q8TAF5 88 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 PLPPR1Q8TBJ4 325 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 TCTEX1D2Q8WW35 142 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 HTR3CQ8WXA8 447 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR1E3Q8WZA6 343 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RAB1CQ92928 201 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 TOP1MTQ969P6 601 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 C8orf44Q96CB5 159 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZBED6CLQ96FA7 236 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 CERS2Q96G23 380 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 KCNA7Q96RP8 456 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 ROGDIQ9GZN7 287 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RACGAP1Q9H0H5 632 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 REEP4Q9H6H4 257 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 UGT1A10Q9HAW8 530 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 NANSQ9NR45 359 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 PXMP2Q9NR77 195 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 PAK1IP1Q9NWT1 392 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 SAMD4AQ9UPU9 718 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 BZW2Q9Y6E2 419 aaKnown RBP3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 PLA2R1Q13018 1463 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 RAPGEF2Q9Y4G8 1499 aa3.54□□□□□ -1.84
HMGB1P48-201ENST00000446155 FAM135BQ49AJ0 1406 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 SIGLEC1Q9BZZ2 1709 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 KIAA0556O60303 1618 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 A0A1B0GUS0 222 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 TUBAL3A6NHL2 446 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 CCT8L1PA6NM43 557 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 E9PQ18 207 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 K7ERQ8 282 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PDHXO00330 501 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSD17B6O14756 317 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 YKT6O15498 198 aa3.53□□□□□ -1.84
HMGB1P48-201ENST00000446155 PI15O43692 258 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms