RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 EEF1E1-BLOC1S5C9J1V9 151 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SRMP19623 302 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 GLP1RP43220 463 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 PCBP4P57723 403 aaKnown RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SGCAQ16586 387 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 C12orf45Q8N5I9 185 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 ZFPM2Q8WW38 1151 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 TRIM43Q96BQ3 446 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 OR10A5Q9H207 317 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 NKX2-4Q9H2Z4 354 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 B3GAT2Q9NPZ5 323 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 IL20Q9NYY1 176 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 KCNIP3Q9Y2W7 256 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 HBQ1P09105 142 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 AKR1C4P17516 323 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 EVI2BP34910 448 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 CCR6P51684 374 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 ERV3-1Q14264 604 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 TCEAL6Q6IPX3 200 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 HAGHLQ6PII5 290 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 FOXRED1Q96CU9 486 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 PGAM5Q96HS1 289 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 PRRT1Q99946 306 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 B3GNT2Q9NY97 397 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 GLCEO94923 617 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SPDEFO95238 335 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SOD1P00441 154 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 MAKP20794 623 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 ARL6IP1Q15041 203 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 C1orf189Q5VU69 101 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 PXKQ7Z7A4 578 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 OR5T3Q8NGG3 340 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 FAM3CQ92520 227 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SLC25A44Q96H78 314 aaPredicted RBP15.37■□□□□ 0.05
TCOF1-206ENST00000445265 ARHGDIGQ99819 225 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 CHST2Q9Y4C5 530 aa15.37■□□□□ 0.05
TCOF1-206ENST00000445265 SCGB1D2O95969 90 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 OPCMLQ14982 345 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 NKPD1Q17RQ9 610 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 TMEM215Q68D42 235 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 SYS1Q8N2H4 156 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 CCDC120Q96HB5 630 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 LPAR4Q99677 370 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 KCNN3Q9UGI6 736 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 KCND3Q9UK17 655 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 SMLR1H3BR10 107 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 PPM1DO15297 605 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 PTPN6P29350 595 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 ADPRHP54922 357 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 HCAR1Q9BXC0 346 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 MBD1Q9UIS9 605 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 SLC22A7Q9Y694 548 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 NINQ8N4C6 2090 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 ZC3H12DA2A288 527 aaKnown RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 PVALBP20472 110 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 ALKBH1Q13686 389 aaKnown RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 PHF19Q5T6S3 580 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 AWAT2Q6E213 333 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 FBXL6Q8N531 539 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 TOE1Q96GM8 510 aaKnown RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 NECAB3Q96P71 396 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 WDR76Q9H967 626 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 A0A087WV62 115 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.36■□□□□ 0.05
TCOF1-206ENST00000445265 APOC1P02654 83 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 KIR2DL3P43628 341 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 VEGFCP49767 419 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 METAP1P53582 386 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 SLC22A8Q8TCC7 542 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 SEMA6CQ9H3T2 930 aa15.36■□□□□ 0.05
TCOF1-206ENST00000445265 MEIS3P1A6NDR6 274 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF511Q8NB15 262 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 PDCD1LG2Q9BQ51 273 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 C20orf85Q9H1P6 137 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 OR2S2Q9NQN1 319 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 SCN4AP35499 1836 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 P2RX6O15547 441 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 PAPLNO95428 1278 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 TACR3P29371 465 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 DHPSP49366 369 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-206ENST00000445265 VAMP2P63027 116 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 HOXB13Q92826 284 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-206ENST00000445265 ATF6BQ99941 703 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 LIN7BQ9HAP6 207 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 FGF17O60258 216 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 SFTPBP07988 381 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 LSSP48449 732 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 CD300CQ08708 224 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 OR7E24Q6IFN5 339 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 DPY19L4Q7Z388 723 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 TCTE3Q8IZS6 198 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 OR51Q1Q8NH59 317 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 SNIP1Q8TAD8 396 aaKnown RBP15.35■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF764Q96H86 408 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-206ENST00000445265 TPSD1Q9BZJ3 242 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 PRDM7Q9NQW5 492 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 ZNF701Q9NV72 531 aaPredicted RBP15.35■□□□□ 0.05
TCOF1-206ENST00000445265 GLS2Q9UI32 602 aa15.35■□□□□ 0.05
TCOF1-206ENST00000445265 MEN1O00255 615 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms