RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CDS1Q92903 461 aa17.34■□□□□ 0.37
SHANK3-203ENST00000445220 SORBS1Q9BX66 1292 aaKnown RBP17.34■□□□□ 0.37
SHANK3-203ENST00000445220 ZNF160Q9HCG1 818 aa17.34■□□□□ 0.37
SHANK3-203ENST00000445220 ACSS1Q9NUB1 689 aaPredicted RBP17.34■□□□□ 0.37
SHANK3-203ENST00000445220 CYTIPO60759 359 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 SYNGR4O95473 234 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 EDN1P05305 212 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 OR1Q1Q15612 314 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 AANATQ16613 207 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 SAXO2Q658L1 398 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 NANPQ8TBE9 248 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 MITD1Q8WV92 249 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 LMF2Q9BU23 707 aaKnown RBP17.33■□□□□ 0.37
SHANK3-203ENST00000445220 ELOVL3Q9HB03 270 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 HSFX1Q9UBD0 423 aa17.33■□□□□ 0.37
SHANK3-203ENST00000445220 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 A6NLC8 198 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 OR2T1O43869 369 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 OR2F2O95006 317 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 GABRR1P24046 479 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 TACR1P25103 407 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 CSNK1DP48730 415 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 OR2F1Q13607 317 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 MPEG1Q2M385 716 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 NOX4Q9NPH5 578 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 MYO9BQ13459 2157 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF44P15621 663 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 SLC39A11Q8N1S5 342 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 KLF16Q9BXK1 252 aaPredicted RBP17.33■□□□□ 0.36
SHANK3-203ENST00000445220 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF43P17038 809 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 CST5P28325 142 aaPredicted RBP17.33■□□□□ 0.36
SHANK3-203ENST00000445220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHANK3-203ENST00000445220 GPR137CQ8N3F9 429 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 CLRN3Q8NCR9 226 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 MBOAT4Q96T53 435 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 TXN2Q99757 166 aa17.33■□□□□ 0.36
SHANK3-203ENST00000445220 HTR2CP28335 458 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 SRP9P49458 86 aaKnown RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 ERVK-16P61578 105 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 TMPPEQ6ZT21 453 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 MDGA2Q7Z553 956 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 CHST14Q8NCH0 376 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 UBE2FQ969M7 185 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 RAB3CQ96E17 227 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 OR7D2Q96RA2 312 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 EXO1Q9UQ84 846 aaKnown RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 F3P13726 295 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 SNTB1Q13884 538 aaKnown RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 RNF151Q2KHN1 245 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 C1orf87Q8N0U7 546 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 IL17RCQ8NAC3 791 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 SGK3Q96BR1 496 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 SLC17A9Q9BYT1 436 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 CPEB1Q9BZB8 566 aaKnown RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 ADAM19Q9H013 955 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 TMEM269A0A1B0GVZ9 245 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 AKR7A2O43488 359 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 DFFBO76075 338 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 PAPLNO95428 1278 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF266Q14584 549 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 CTSL3PQ5NE16 218 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 OR8G3PP0DMU2 310 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 ADRA1AP35348 466 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 PKDCCQ504Y2 493 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 EXOSC6Q5RKV6 272 aaKnown RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 FIGLAQ6QHK4 219 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 ABHD12BQ7Z5M8 362 aaPredicted RBP17.32■□□□□ 0.36
SHANK3-203ENST00000445220 TCTE3Q8IZS6 198 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 KCNRGQ8N5I3 272 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 RNF167Q9H6Y7 350 aa17.32■□□□□ 0.36
SHANK3-203ENST00000445220 TMEM129A0AVI4 362 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 TIMP1P01033 207 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 SELENOVP59797 346 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 PDE7AQ13946 482 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 BAGE3Q86Y29 109 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 BAGE2Q86Y30 109 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 ACOT4Q8N9L9 421 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 DEFB126Q9BYW3 111 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NDRG4Q9ULP0 352 aaKnown RBP17.31■□□□□ 0.36
SHANK3-203ENST00000445220 PRELID3BQ9Y3B1 194 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 ELAVL4P26378 380 aaKnown RBP17.31■□□□□ 0.36
SHANK3-203ENST00000445220 LAP3P28838 519 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 CLDN20P56880 219 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 OR56B1Q8NGI3 324 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 ZNF566Q969W8 418 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 MED20Q9H944 212 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 ALS2Q96Q42 1657 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NPIPA5A0A0B4J1W7 369 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NPIPA7E9PJI5 369 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 DUX1O43812 170 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 LILRB3O75022 631 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 MT-ND4LP03901 98 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NPIPA8P0DM63 369 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 RPS18P62269 152 aaKnown RBP17.31■□□□□ 0.36
SHANK3-203ENST00000445220 HTR3DQ70Z44 454 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 NAA40Q86UY6 237 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 TMEM130Q8N3G9 435 aa17.31■□□□□ 0.36
SHANK3-203ENST00000445220 CPNE4Q96A23 557 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms