RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 HPCAL1P37235 193 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 IDH2P48735 452 aaKnown RBP11.93□□□□□ -0.5
LINC00642-202ENST00000442515 SH3BGRP55822 239 aaPredicted RBP11.93□□□□□ -0.5
LINC00642-202ENST00000442515 LIPMQ5VYY2 423 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 FRMD7Q6ZUT3 714 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 MDP1Q86V88 176 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 PMM1Q92871 262 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 RAB39BQ96DA2 213 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 PIF1Q9H611 641 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 ZDHHC18Q9NUE0 388 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 ATP6V1HQ9UI12 483 aa11.93□□□□□ -0.5
LINC00642-202ENST00000442515 LIPT2A6NK58 231 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 H3BQF6 201 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 AP3D1O14617 1153 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 ALX3O95076 343 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 GPIP06744 558 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 RNASE1P07998 156 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 SNRPAP09012 282 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 UROSP10746 265 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 NAT2P11245 290 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 HTR3AP46098 478 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 POLR2HP52434 150 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 ROR2Q01974 943 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 MVKQ03426 396 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 CEACAM7Q14002 265 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 OR7A5Q15622 319 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 NIPAL3Q6P499 406 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 LEG1Q6P5S2 330 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 HMGN2P46Q86SG4 172 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 LRP11Q86VZ4 500 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 GSPT2Q8IYD1 628 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 IL17RDQ8NFM7 739 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 MOAP1Q96BY2 351 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 EXOSC3Q9NQT5 275 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 MYEF2Q9P2K5 600 aaKnown RBP11.92□□□□□ -0.5
LINC00642-202ENST00000442515 TMED5Q9Y3A6 229 aa11.92□□□□□ -0.5
LINC00642-202ENST00000442515 WNK1Q9H4A3 2382 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 CLDN24A6NM45 220 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 NEFHP12036 1026 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 MATN1P21941 496 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 GATA3P23771 443 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 TACR3P29371 465 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 SOAT1P35610 550 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 CAPZA2P47755 286 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 P2RY4P51582 365 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 ARF1P84077 181 aaKnown RBP11.91□□□□□ -0.5
LINC00642-202ENST00000442515 SRSF4Q08170 494 aaKnown RBP11.91□□□□□ -0.5
LINC00642-202ENST00000442515 BAMBIQ13145 260 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 ARHGAP11BQ3KRB8 267 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 FAM153CQ494X1 144 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 TYW3Q6IPR3 259 aaKnown RBP11.91□□□□□ -0.5
LINC00642-202ENST00000442515 CREB3L2Q70SY1 520 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 C16orf62Q7Z3J2 963 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 LCA5Q86VQ0 697 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 ARFGAP2Q8N6H7 521 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 KIF18AQ8NI77 898 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 OIT3Q8WWZ8 545 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 LINC00470Q9BZP3 86 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 MMP27Q9H306 513 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 ZNF385DQ9H6B1 395 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 PDP1Q9P0J1 537 aaPredicted RBP11.91□□□□□ -0.5
LINC00642-202ENST00000442515 FZR1Q9UM11 496 aa11.91□□□□□ -0.5
LINC00642-202ENST00000442515 DUXAA6NLW8 204 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 LSM1O15116 133 aaKnown RBP11.9□□□□□ -0.5
LINC00642-202ENST00000442515 CDC14BO60729 498 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 GLRXP35754 106 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 MAGEB1P43366 347 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 GALNTL6Q49A17 601 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 TMEM225Q6GV28 225 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 TIFABQ6ZNK6 161 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 EPHX4Q8IUS5 362 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 RELL1Q8IUW5 271 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 MS4A3Q96HJ5 214 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 ZNF48Q96MX3 618 aaPredicted RBP11.9□□□□□ -0.5
LINC00642-202ENST00000442515 TUBB1Q9H4B7 451 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 ADPRHL2Q9NX46 363 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 ZNF69Q9UC07 566 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 WDR45Q9Y484 360 aa11.9□□□□□ -0.5
LINC00642-202ENST00000442515 A0A1W2PPW3 197 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 G3V2L1 256 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 SCN2BO60939 215 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 RPL3P39023 403 aaKnown RBP11.89□□□□□ -0.51
LINC00642-202ENST00000442515 MAP2K6P52564 334 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 HBA1P69905 142 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 KCNJ10P78508 379 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 LSM12Q3MHD2 195 aaKnown RBP11.89□□□□□ -0.51
LINC00642-202ENST00000442515 FBLN7Q53RD9 439 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 SYT10Q6XYQ8 523 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 FRRS1Q6ZNA5 592 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 CLEC4FQ8N1N0 589 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 WFDC12Q8WWY7 111 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 CNOT9Q92600 299 aaKnown RBP11.89□□□□□ -0.51
LINC00642-202ENST00000442515 ZG16BQ96DA0 208 aa11.89□□□□□ -0.51
LINC00642-202ENST00000442515 CCDC126Q96EE4 140 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms