RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 COPS3Q9UNS2 423 aa5.88□□□□□ -1.47
HDAC6-210ENST00000441703 CCL27Q9Y4X3 112 aa5.88□□□□□ -1.47
HDAC6-210ENST00000441703 CACNG2Q9Y698 323 aa5.88□□□□□ -1.47
HDAC6-210ENST00000441703 A0A0A6YYJ9 748 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 A0A1W2PPL8 197 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 OR14I1A6ND48 311 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 C2orf81A6NN90 581 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 RNF223E7ERA6 249 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 F8W036 122 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SMLR1H3BR10 107 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PLOD3O60568 738 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CTSVO60911 334 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SCN2BO60939 215 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CDRT1O95170 752 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FHP07954 510 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ACSM4P0C7M7 580 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 HSMCR30P0CW71 290 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PEPDP12955 493 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ITGALP20701 1170 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 AZGP1P25311 298 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PSMA3P25788 255 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 STOMP27105 288 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 EVX1P49640 407 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 EFNA3P52797 238 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ATP12AP54707 1039 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CLDN8P56748 225 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SNRPGP62308 76 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MAP4K2Q12851 820 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PTPRCAPQ14761 206 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ZMYND11Q15326 602 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FCN2Q15485 313 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SPHARQ15513 63 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MED22Q15528 200 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TAF1AQ15573 450 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TSNQ15631 228 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ACKR1Q16570 336 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 HYAL4Q2M3T9 481 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 VMACQ2NL98 169 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TUSC1Q2TAM9 212 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 LGALSLQ3ZCW2 172 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 GPR33Q49SQ1 333 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PLA1AQ53H76 456 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TMEM201Q5SNT2 666 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FAM219BQ5XKK7 198 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 HIST2H2BDQ6DRA6 164 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MZT2AQ6P582 158 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FIGLAQ6QHK4 219 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SCIMPQ6UWF3 145 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ZNF730Q6ZMV8 503 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ZNF704Q6ZNC4 412 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CFAP77Q6ZQR2 320 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 KRT74Q7RTS7 529 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 HSD17B13Q7Z5P4 300 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CPEB2Q7Z5Q1 589 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SULF2Q8IWU5 870 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 LIX1Q8N485 282 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MEIOBQ8N635 442 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 NANOGP1Q8N7R0 232 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 LINC01555Q8NAE3 123 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 RELL2Q8NC24 303 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CLRN3Q8NCR9 226 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PROKR2Q8NFJ6 384 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 OR4C15Q8NGM1 316 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 C16orf52Q8NHV5 167 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 M1APQ8TC57 530 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SMPDL3BQ92485 455 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SLC9A6Q92581 669 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 EXT2Q93063 718 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 UPRTQ96BW1 309 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ZMYND19Q96E35 227 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 KCNC2Q96PR1 638 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 OR52E6Q96RD3 313 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 NPAS1Q99742 590 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ZFYVE21Q9BQ24 234 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 C19orf43Q9BQ61 176 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FSD1LQ9BXM9 530 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SLC19A3Q9BZV2 496 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 GHITMQ9H3K2 345 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CDCP1Q9H5V8 836 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 EXOSC4Q9NPD3 245 aaKnown RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MKKSQ9NPJ1 570 aaPredicted RBP5.87□□□□□ -1.47
HDAC6-210ENST00000441703 PLSCR2Q9NRY7 297 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SDHAF2Q9NX18 166 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 COA4Q9NYJ1 87 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TAS2R13Q9NYV9 303 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 EMC3Q9P0I2 261 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 GALPQ9UBC7 116 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 NLKQ9UBE8 527 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 SCP2D1Q9UJQ7 156 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ACAD8Q9UKU7 415 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 TMCC3Q9ULS5 477 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 FAM215AQ9Y5M1 114 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 ARL5AQ9Y689 179 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 CLCA3PQ9Y6N3 262 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 NOTCH1P46531 2555 aa5.87□□□□□ -1.47
HDAC6-210ENST00000441703 MEIKINA0A087WXM9 373 aa5.86□□□□□ -1.47
HDAC6-210ENST00000441703 TRBV5-4A0A0C4DH59 114 aa5.86□□□□□ -1.47
HDAC6-210ENST00000441703 A0A1W2PPR1 153 aa5.86□□□□□ -1.47
HDAC6-210ENST00000441703 ARRDC5A6NEK1 342 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms